RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-204ENST00000395466 MEGF6O75095 1541 aa17.08■□□□□ 0.32
SNCAIP-204ENST00000395466 PRAMEF22A3QJZ6 481 aa17.07■□□□□ 0.32
SNCAIP-204ENST00000395466 PKD1L3Q7Z443 1732 aa17.07■□□□□ 0.32
SNCAIP-204ENST00000395466 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
SNCAIP-204ENST00000395466 ERC2O15083 957 aa17.06■□□□□ 0.32
SNCAIP-204ENST00000395466 RAB11FIP3O75154 756 aa17.06■□□□□ 0.32
SNCAIP-204ENST00000395466 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
SNCAIP-204ENST00000395466 AK9Q5TCS8 1911 aa17.06■□□□□ 0.32
SNCAIP-204ENST00000395466 AOX1Q06278 1338 aa17.06■□□□□ 0.32
SNCAIP-204ENST00000395466 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 REC8O95072 547 aa17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 NLRP2Q9NX02 1062 aa17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNCAIP-204ENST00000395466 PHKG2P15735 406 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 MAP3K2Q9Y2U5 619 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 MRC1P22897 1456 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
SNCAIP-204ENST00000395466 ALDH1L1O75891 902 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 MTX1Q13505 466 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 SRGAP3O43295 1099 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 PDIA6Q15084 440 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 RHPN1Q8TCX5 695 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 ESYT1Q9BSJ8 1104 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 IL1RAPL2Q9NP60 686 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
SNCAIP-204ENST00000395466 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
SNCAIP-204ENST00000395466 DDX21Q9NR30 783 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNCAIP-204ENST00000395466 CPDO75976 1380 aa17.02■□□□□ 0.31
SNCAIP-204ENST00000395466 CHMLP26374 656 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 TNPO1Q92973 898 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 SPG7Q9UQ90 795 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 HSPA2P54652 639 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
SNCAIP-204ENST00000395466 NUTM1Q86Y26 1132 aa17■□□□□ 0.31
SNCAIP-204ENST00000395466 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
SNCAIP-204ENST00000395466 FOXD4L1Q9NU39 408 aa17■□□□□ 0.31
SNCAIP-204ENST00000395466 UTYO14607 1347 aa16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 STRCQ7RTU9 1775 aa16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
SNCAIP-204ENST00000395466 GLI3P10071 1580 aa16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 USP42Q9H9J4 1324 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 TRIM6-TRIM34B2RNG4 842 aa16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 RILPL2Q969X0 211 aa16.98■□□□□ 0.31
SNCAIP-204ENST00000395466 DDX11L8A8MPP1 907 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 CSB-PGBD3P0DP91 1061 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 ZNF496Q96IT1 587 aaPredicted RBP16.97■□□□□ 0.31
SNCAIP-204ENST00000395466 TRAK2O60296 914 aa16.96■□□□□ 0.31
SNCAIP-204ENST00000395466 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
SNCAIP-204ENST00000395466 LRP10Q7Z4F1 713 aa16.96■□□□□ 0.31
SNCAIP-204ENST00000395466 DCAF5Q96JK2 942 aa16.96■□□□□ 0.31
SNCAIP-204ENST00000395466 GRM8O00222 908 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 ST18O60284 1047 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 IL25Q9H293 177 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 IGKV5-2P06315 115 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 CLEC17AQ6ZS10 378 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
SNCAIP-204ENST00000395466 ABCA3Q99758 1704 aa16.94■□□□□ 0.3
SNCAIP-204ENST00000395466 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
SNCAIP-204ENST00000395466 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
SNCAIP-204ENST00000395466 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
SNCAIP-204ENST00000395466 EPB41L2O43491 1005 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 SSFA2P28290 1259 aa16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 ANAPC15P60006 121 aa16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 GBP4Q96PP9 640 aa16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 AFDNP55196 1824 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 LARP1Q6PKG0 1096 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 PA2G4Q9UQ80 394 aaKnown RBP16.93■□□□□ 0.3
SNCAIP-204ENST00000395466 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 TTC41PQ6P2S7 1318 aa16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 BICC1Q9H694 974 aaKnown RBP16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 BRPF3Q9ULD4 1205 aa16.92■□□□□ 0.3
SNCAIP-204ENST00000395466 USP16Q9Y5T5 823 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms