RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 ADAMTS2O95450 1211 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 NR1H3Q13133 447 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 NAALADL2Q58DX5 795 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
PFDN6-205ENST00000395134 FAM200AQ8TCP9 573 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 STK26Q9P289 416 aa12.29□□□□□ -0.44
PFDN6-205ENST00000395134 PPP1R1BQ9UD71 204 aaPredicted RBP12.29□□□□□ -0.44
PFDN6-205ENST00000395134 MARF1Q9Y4F3 1742 aaKnown RBP12.28□□□□□ -0.44
PFDN6-205ENST00000395134 SKIP12755 728 aa12.28□□□□□ -0.44
PFDN6-205ENST00000395134 ATP2B4P23634 1241 aa12.28□□□□□ -0.44
PFDN6-205ENST00000395134 CRTC2Q53ET0 693 aaPredicted RBP12.28□□□□□ -0.44
PFDN6-205ENST00000395134 ORAI2Q96SN7 254 aa12.28□□□□□ -0.44
PFDN6-205ENST00000395134 CDCA7Q9BWT1 371 aaPredicted RBP12.28□□□□□ -0.44
PFDN6-205ENST00000395134 ADGRF5Q8IZF2 1346 aa12.28□□□□□ -0.44
PFDN6-205ENST00000395134 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.44
PFDN6-205ENST00000395134 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
PFDN6-205ENST00000395134 RECKO95980 971 aa12.27□□□□□ -0.45
PFDN6-205ENST00000395134 LARP1Q6PKG0 1096 aaKnown RBP12.27□□□□□ -0.45
PFDN6-205ENST00000395134 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
PFDN6-205ENST00000395134 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 C7P10643 843 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
PFDN6-205ENST00000395134 PTK7Q13308 1070 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 FBXO33Q7Z6M2 555 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 HLA-CQ95604 372 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 LRRC59Q96AG4 307 aaKnown RBP12.26□□□□□ -0.45
PFDN6-205ENST00000395134 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
PFDN6-205ENST00000395134 TSKSQ9UJT2 592 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 RPGRIP1LQ68CZ1 1315 aa12.26□□□□□ -0.45
PFDN6-205ENST00000395134 C3orf80F5H4A9 247 aa12.25□□□□□ -0.45
PFDN6-205ENST00000395134 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
PFDN6-205ENST00000395134 RXRBP28702 533 aa12.25□□□□□ -0.45
PFDN6-205ENST00000395134 ASTLQ6HA08 431 aaPredicted RBP12.25□□□□□ -0.45
PFDN6-205ENST00000395134 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 RGS12O14924 1447 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 TMEM132EQ6IEE7 984 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 PRAG1Q86YV5 1406 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 COL22A1Q8NFW1 1626 aaPredicted RBP12.24□□□□□ -0.45
PFDN6-205ENST00000395134 TATDN2Q93075 761 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 PNMA3Q9UL41 463 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 PLEKHH1Q9ULM0 1364 aa12.24□□□□□ -0.45
PFDN6-205ENST00000395134 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
PFDN6-205ENST00000395134 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
PFDN6-205ENST00000395134 C1orf216Q8TAB5 229 aa12.23□□□□□ -0.45
PFDN6-205ENST00000395134 RASA1P20936 1047 aa12.22□□□□□ -0.45
PFDN6-205ENST00000395134 TAGLNQ01995 201 aaKnown RBP12.22□□□□□ -0.45
PFDN6-205ENST00000395134 ESCO1Q5FWF5 840 aa12.22□□□□□ -0.45
PFDN6-205ENST00000395134 DEPDC4Q8N2C3 294 aa12.22□□□□□ -0.45
PFDN6-205ENST00000395134 NGLY1Q96IV0 654 aa12.22□□□□□ -0.45
PFDN6-205ENST00000395134 PXDNQ92626 1479 aa12.21□□□□□ -0.45
PFDN6-205ENST00000395134 PIK3C2GO75747 1445 aa12.21□□□□□ -0.45
PFDN6-205ENST00000395134 SOS2Q07890 1332 aaPredicted RBP12.21□□□□□ -0.45
PFDN6-205ENST00000395134 SWI5Q1ZZU3 235 aa12.21□□□□□ -0.45
PFDN6-205ENST00000395134 ANKMY2Q8IV38 441 aa12.21□□□□□ -0.45
PFDN6-205ENST00000395134 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.46
PFDN6-205ENST00000395134 LRPPRCP42704 1394 aaKnown RBP12.2□□□□□ -0.46
PFDN6-205ENST00000395134 ANKRD30BQ9BXX2 1392 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 COL9A1P20849 921 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 ANKRD13AQ8IZ07 590 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
PFDN6-205ENST00000395134 EGFL7Q9UHF1 273 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 TECPR2O15040 1411 aa12.2□□□□□ -0.46
PFDN6-205ENST00000395134 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
PFDN6-205ENST00000395134 FOXO3O43524 673 aa12.19□□□□□ -0.46
PFDN6-205ENST00000395134 SCNN1AP37088 669 aa12.19□□□□□ -0.46
PFDN6-205ENST00000395134 SAFB2Q14151 953 aaKnown RBP eCLIP12.19□□□□□ -0.46
PFDN6-205ENST00000395134 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
PFDN6-205ENST00000395134 ABCA3Q99758 1704 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 ZBBXA8MT70 800 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 TSNAXIP1Q2TAA8 658 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 FAM174AQ8TBP5 190 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 MYOM2P54296 1465 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 RAB3GAP2Q9H2M9 1393 aa12.18□□□□□ -0.46
PFDN6-205ENST00000395134 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
PFDN6-205ENST00000395134 PER1O15534 1290 aaPredicted RBP12.17□□□□□ -0.46
PFDN6-205ENST00000395134 ERCC5P28715 1186 aaPredicted RBP12.17□□□□□ -0.46
PFDN6-205ENST00000395134 CLCN6P51797 869 aa12.17□□□□□ -0.46
PFDN6-205ENST00000395134 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
PFDN6-205ENST00000395134 USP21Q9UK80 565 aa12.17□□□□□ -0.46
PFDN6-205ENST00000395134 LZTS3O60299 673 aaPredicted RBP12.16□□□□□ -0.46
PFDN6-205ENST00000395134 SEC24BO95487 1268 aa12.16□□□□□ -0.46
PFDN6-205ENST00000395134 PACS2Q86VP3 889 aa12.16□□□□□ -0.46
PFDN6-205ENST00000395134 ASB16Q96NS5 453 aa12.16□□□□□ -0.46
PFDN6-205ENST00000395134 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
PFDN6-205ENST00000395134 PLCH1Q4KWH8 1693 aa12.16□□□□□ -0.46
PFDN6-205ENST00000395134 USP32Q8NFA0 1604 aa12.15□□□□□ -0.46
PFDN6-205ENST00000395134 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.15□□□□□ -0.46
PFDN6-205ENST00000395134 NCOA4Q13772 614 aa12.15□□□□□ -0.46
PFDN6-205ENST00000395134 COL19A1Q14993 1142 aa12.15□□□□□ -0.46
PFDN6-205ENST00000395134 NRXN1Q9ULB1 1477 aa12.14□□□□□ -0.47
PFDN6-205ENST00000395134 ATRNO75882 1429 aa12.14□□□□□ -0.47
PFDN6-205ENST00000395134 ABL1P00519 1130 aa12.14□□□□□ -0.47
PFDN6-205ENST00000395134 SLC10A3P09131 477 aa12.14□□□□□ -0.47
PFDN6-205ENST00000395134 MAPK1P28482 360 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms