RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 PTCD1O75127 700 aaKnown RBP21.48■■□□□ 1.03
SLC6A4-202ENST00000394821 ASAP1Q9ULH1 1129 aa21.48■■□□□ 1.03
SLC6A4-202ENST00000394821 ANP32AP39687 249 aaKnown RBP21.48■■□□□ 1.03
SLC6A4-202ENST00000394821 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
SLC6A4-202ENST00000394821 TMOD3Q9NYL9 352 aa21.48■■□□□ 1.03
SLC6A4-202ENST00000394821 PAPPAQ13219 1627 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 ZBTB7BO15156 539 aaPredicted RBP21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 SLC4A10Q6U841 1118 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 SYTL4Q96C24 671 aaPredicted RBP21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 CACNA1FO60840 1977 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 FAM161AQ3B820 660 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 CDCA7Q9BWT1 371 aaPredicted RBP21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 C1orf115Q9H7X2 142 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 KCPQ6ZWJ8 1503 aa21.47■■□□□ 1.03
SLC6A4-202ENST00000394821 UBR2Q8IWV8 1755 aa21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 PDIA6Q15084 440 aa21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 DOT1LQ8TEK3 1739 aa21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 HDAC1Q13547 482 aaPredicted RBP21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 PDZRN3Q9UPQ7 1066 aa21.46■■□□□ 1.03
SLC6A4-202ENST00000394821 SNRPA1P09661 255 aaKnown RBP21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 NPM2Q86SE8 214 aaKnown RBP21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 A0A0G2JS52 829 aa21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 IPO9Q96P70 1041 aaKnown RBP21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 ATG3Q9NT62 314 aa21.44■■□□□ 1.02
SLC6A4-202ENST00000394821 MYL6BP14649 208 aa21.43■■□□□ 1.02
SLC6A4-202ENST00000394821 MYT1Q01538 1121 aa21.43■■□□□ 1.02
SLC6A4-202ENST00000394821 DBF4Q9UBU7 674 aaPredicted RBP21.43■■□□□ 1.02
SLC6A4-202ENST00000394821 FAM182BQ5T319 152 aa21.43■■□□□ 1.02
SLC6A4-202ENST00000394821 BCL9O00512 1426 aa21.42■■□□□ 1.02
SLC6A4-202ENST00000394821 GJD4Q96KN9 370 aaPredicted RBP21.41■■□□□ 1.02
SLC6A4-202ENST00000394821 AIMP1Q12904 312 aaKnown RBP21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 KCNQ2O43526 872 aa21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 MEIS3Q99687 375 aa21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 ANP32EQ9BTT0 268 aa21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
SLC6A4-202ENST00000394821 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
SLC6A4-202ENST00000394821 ADCY9O60503 1353 aa21.39■■□□□ 1.01
SLC6A4-202ENST00000394821 LRP10Q7Z4F1 713 aa21.38■■□□□ 1.01
SLC6A4-202ENST00000394821 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
SLC6A4-202ENST00000394821 SMC5Q8IY18 1101 aa21.38■■□□□ 1.01
SLC6A4-202ENST00000394821 RBM42Q9BTD8 480 aaKnown RBP21.38■■□□□ 1.01
SLC6A4-202ENST00000394821 LAMB4A4D0S4 1761 aa21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 NBPF26B4DH59 902 aa21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 A1BGP04217 495 aa21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 NBPF14Q5TI25 921 aa21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 NBPF10Q6P3W6 841 aaKnown RBP21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 NBPF15Q8N660 670 aa21.37■■□□□ 1.01
SLC6A4-202ENST00000394821 THSD7AQ9UPZ6 1657 aa21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 EP400Q96L91 3159 aa21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 ATRNO75882 1429 aa21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 DNAJC10Q8IXB1 793 aa21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 HYPKQ9NX55 129 aa21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 NOP58Q9Y2X3 529 aaKnown RBP21.36■■□□□ 1.01
SLC6A4-202ENST00000394821 COPS6Q7L5N1 327 aa21.35■■□□□ 1.01
SLC6A4-202ENST00000394821 SIRT2Q8IXJ6 389 aa21.35■■□□□ 1.01
SLC6A4-202ENST00000394821 XAGE3Q8WTP9 111 aa21.35■■□□□ 1.01
SLC6A4-202ENST00000394821 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
SLC6A4-202ENST00000394821 CCT4P50991 539 aaKnown RBP21.34■■□□□ 1.01
SLC6A4-202ENST00000394821 TRPC5Q9UL62 973 aaPredicted RBP21.34■■□□□ 1.01
SLC6A4-202ENST00000394821 DNAAF4Q8WXU2 420 aa21.33■■□□□ 1.01
SLC6A4-202ENST00000394821 CHMP4AQ9BY43 222 aa21.33■■□□□ 1.01
SLC6A4-202ENST00000394821 BEND3Q5T5X7 828 aa21.32■■□□□ 1
SLC6A4-202ENST00000394821 CHMP4BQ9H444 224 aaKnown RBP21.32■■□□□ 1
SLC6A4-202ENST00000394821 N4BP2Q86UW6 1770 aaPredicted RBP21.32■■□□□ 1
SLC6A4-202ENST00000394821 KSR2Q6VAB6 950 aa21.31■■□□□ 1
SLC6A4-202ENST00000394821 SEPT12Q8IYM1 358 aa21.3■■□□□ 1
SLC6A4-202ENST00000394821 USP44Q9H0E7 712 aa21.3■■□□□ 1
SLC6A4-202ENST00000394821 CWF19L2Q2TBE0 894 aaKnown RBP21.3■■□□□ 1
SLC6A4-202ENST00000394821 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
SLC6A4-202ENST00000394821 PXDNLA1KZ92 1463 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 SEC24BO95487 1268 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 ATP10DQ9P241 1426 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
SLC6A4-202ENST00000394821 NUCB1Q02818 461 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 TTLL7Q6ZT98 887 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 SRCIN1Q9C0H9 1055 aa21.29■■□□□ 1
SLC6A4-202ENST00000394821 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
SLC6A4-202ENST00000394821 RIC3Q7Z5B4 369 aa21.27■■□□□ 1
SLC6A4-202ENST00000394821 TJP1Q07157 1748 aa21.27■■□□□ 1
SLC6A4-202ENST00000394821 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
SLC6A4-202ENST00000394821 VSIG10Q8N0Z9 540 aa21.27■■□□□ 1
SLC6A4-202ENST00000394821 KCNQ4P56696 695 aa21.26■□□□□ 0.99
SLC6A4-202ENST00000394821 CEP85Q6P2H3 762 aa21.26■□□□□ 0.99
SLC6A4-202ENST00000394821 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
SLC6A4-202ENST00000394821 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
SLC6A4-202ENST00000394821 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
SLC6A4-202ENST00000394821 CYP19A1P11511 503 aaPredicted RBP21.25■□□□□ 0.99
SLC6A4-202ENST00000394821 DDX58O95786 925 aaKnown RBP21.24■□□□□ 0.99
SLC6A4-202ENST00000394821 ITPK1Q13572 414 aa21.24■□□□□ 0.99
SLC6A4-202ENST00000394821 CHD1LQ86WJ1 897 aa21.24■□□□□ 0.99
SLC6A4-202ENST00000394821 MYD88Q99836 296 aa21.24■□□□□ 0.99
SLC6A4-202ENST00000394821 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms