RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FLT4P35916 1363 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 HS1BP3Q53T59 392 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 GORABQ5T7V8 394 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 SASS6Q6UVJ0 657 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 GAS2L3Q86XJ1 694 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 BECN2A8MW95 431 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 KRT85P78386 507 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 DNAAF4Q8WXU2 420 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 CHMP4CQ96CF2 233 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 PNPLA6Q8IY17 1366 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 AACSQ86V21 672 aa13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 CCDC9Q9Y3X0 531 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 UBE2Q2Q8WVN8 375 aa13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 INTS4Q96HW7 963 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 NPHP4O75161 1426 aaPredicted RBP13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
UBE2D3-209ENST00000394804 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 CHMLP26374 656 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 CCDC83Q8IWF9 413 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 LMBRD1Q9NUN5 540 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 ADGRB1O14514 1584 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 RHPN1Q8TCX5 695 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 TPM4P67936 248 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 BLOC1S2Q6QNY1 142 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 USHBP1Q8N6Y0 703 aa13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-209ENST00000394804 ZNF335Q9H4Z2 1342 aaPredicted RBP13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 GNL2Q13823 731 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 SH2B1Q9NRF2 756 aaPredicted RBP13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 RAPGEF4Q8WZA2 1011 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 STX6O43752 255 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 EYA1Q99502 592 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 RBSNQ9H1K0 784 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 ZKSCAN5Q9Y2L8 839 aa13.92□□□□□ -0.18
UBE2D3-209ENST00000394804 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
UBE2D3-209ENST00000394804 USP25Q9UHP3 1055 aa13.91□□□□□ -0.18
UBE2D3-209ENST00000394804 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
UBE2D3-209ENST00000394804 OFD1O75665 1012 aa13.91□□□□□ -0.18
UBE2D3-209ENST00000394804 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 PDCL3Q9H2J4 239 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 SIL1Q9H173 461 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 PI4KAP2A4QPH2 592 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 CCDC73Q6ZRK6 1079 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 PI4KAP1Q8N8J0 262 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 SPC24Q8NBT2 197 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 LARP6Q9BRS8 491 aaKnown RBP13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.18
UBE2D3-209ENST00000394804 UBE2HP62256 183 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 UVSSAQ2YD98 709 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 SIRT1Q96EB6 747 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 PPP1R9BQ96SB3 815 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 TRIM5Q9C035 493 aa13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 ZNF330Q9Y3S2 320 aaPredicted RBP13.9□□□□□ -0.19
UBE2D3-209ENST00000394804 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 ARHGAP23Q9P227 1491 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 METP08581 1390 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 SLIT1O75093 1534 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 ZSCAN22P10073 491 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 USP48Q86UV5 1035 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 DBF4Q9UBU7 674 aaPredicted RBP13.89□□□□□ -0.19
UBE2D3-209ENST00000394804 KCNA6P17658 529 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 PKP1Q13835 747 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 A0A0G2JS52 829 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 STK3Q13188 491 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 FERMT3Q86UX7 667 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 SBNO1A3KN83 1393 aa13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-209ENST00000394804 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 USP32Q8NFA0 1604 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 PNMA6EA0A0J9YXQ4 647 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 MAP3K11Q16584 847 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 SPATA32Q96LK8 384 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 PLEKHG3A1L390 1219 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 GJB2P29033 226 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 EVI5LQ96CN4 794 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 DNAJC2Q99543 621 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 KIF2CQ99661 725 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 NLRP2Q9NX02 1062 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 ARHGEF10O15013 1369 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 MAP3K5Q99683 1374 aa13.87□□□□□ -0.19
UBE2D3-209ENST00000394804 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms