RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 TINF2Q9BSI4 451 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 UPF2Q9HAU5 1272 aaKnown RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 DNMT3AQ9Y6K1 912 aaPredicted RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 USP47Q96K76 1375 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 RGS3P49796 1198 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 SKOR2Q2VWA4 1001 aaPredicted RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 ZNF526Q8TF50 670 aaPredicted RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 PURBQ96QR8 312 aaKnown RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 CHMP5Q9NZZ3 219 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 FUT2Q10981 343 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 GTF3C2Q8WUA4 911 aaPredicted RBP8.25□□□□□ -1.09
SGMS2-203ENST00000394686 TATDN2Q93075 761 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 PPP1R9BQ96SB3 815 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 PANK2Q9BZ23 570 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 PARD3Q8TEW0 1356 aa8.25□□□□□ -1.09
SGMS2-203ENST00000394686 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
SGMS2-203ENST00000394686 EAPPQ56P03 285 aaPredicted RBP8.24□□□□□ -1.09
SGMS2-203ENST00000394686 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 NFATC2IPQ8NCF5 419 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 NLRP1Q9C000 1473 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 ROCK1Q13464 1354 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 DYNC1I1O14576 645 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 TMED8Q6PL24 325 aaPredicted RBP8.24□□□□□ -1.09
SGMS2-203ENST00000394686 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 NEO1Q92859 1461 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 UHRF1BP1Q6BDS2 1440 aa8.24□□□□□ -1.09
SGMS2-203ENST00000394686 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 ZBBXA8MT70 800 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 SCAMP3O14828 347 aaKnown RBP8.23□□□□□ -1.09
SGMS2-203ENST00000394686 NUDT7P0C024 238 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 LHX8Q68G74 356 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 PNMA1Q8ND90 353 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 ACBD3Q9H3P7 528 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 ARAP3Q8WWN8 1544 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 NINLQ9Y2I6 1382 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 ATMINO43313 823 aaPredicted RBP8.23□□□□□ -1.09
SGMS2-203ENST00000394686 DKK1O94907 266 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 KIF20AO95235 890 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 USP46P62068 366 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 DMTNQ08495 405 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 TAF3Q5VWG9 929 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 PMFBP1Q8TBY8 1022 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 ANP32BQ92688 251 aaKnown RBP8.23□□□□□ -1.09
SGMS2-203ENST00000394686 RALGAPBQ86X10 1494 aa8.23□□□□□ -1.09
SGMS2-203ENST00000394686 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
SGMS2-203ENST00000394686 RIPK4P57078 832 aa8.22□□□□□ -1.09
SGMS2-203ENST00000394686 PLPP7Q8NBV4 271 aa8.22□□□□□ -1.09
SGMS2-203ENST00000394686 SETDB2Q96T68 719 aa8.22□□□□□ -1.09
SGMS2-203ENST00000394686 GTPBP4Q9BZE4 634 aaKnown RBP8.22□□□□□ -1.09
SGMS2-203ENST00000394686 SLKQ9H2G2 1235 aaPredicted RBP8.22□□□□□ -1.09
SGMS2-203ENST00000394686 CAPN10Q9HC96 672 aa8.22□□□□□ -1.09
SGMS2-203ENST00000394686 IBTKQ9P2D0 1353 aaPredicted RBP8.22□□□□□ -1.09
SGMS2-203ENST00000394686 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
SGMS2-203ENST00000394686 MSNP26038 577 aaKnown RBP8.21□□□□□ -1.09
SGMS2-203ENST00000394686 SWI5Q1ZZU3 235 aa8.21□□□□□ -1.09
SGMS2-203ENST00000394686 TAS1R3Q7RTX0 852 aa8.21□□□□□ -1.09
SGMS2-203ENST00000394686 TMEM87AQ8NBN3 555 aa8.21□□□□□ -1.09
SGMS2-203ENST00000394686 TBC1D32Q96NH3 1257 aa8.21□□□□□ -1.09
SGMS2-203ENST00000394686 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.09
SGMS2-203ENST00000394686 TTC37Q6PGP7 1564 aa8.21□□□□□ -1.09
SGMS2-203ENST00000394686 C21orf2O43822 256 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 PLIN1O60240 522 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 MCM5P33992 734 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 TAF7LQ5H9L4 462 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 CEP126Q9P2H0 1117 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 KLHL42Q9P2K6 505 aa8.21□□□□□ -1.1
SGMS2-203ENST00000394686 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.21□□□□□ -1.1
SGMS2-203ENST00000394686 SFI1A8K8P3 1242 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 ATP5J2-PTCD1G3V325 749 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 ZNF500O60304 480 aaPredicted RBP8.2□□□□□ -1.1
SGMS2-203ENST00000394686 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
SGMS2-203ENST00000394686 CNGB1Q14028 1251 aaPredicted RBP8.2□□□□□ -1.1
SGMS2-203ENST00000394686 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 LARGE2Q8N3Y3 721 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 ARHGEF12Q9NZN5 1544 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 RICTORQ6R327 1708 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 ANKRD30AQ9BXX3 1397 aa8.2□□□□□ -1.1
SGMS2-203ENST00000394686 PREX2Q70Z35 1606 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 LETM1O95202 739 aaPredicted RBP8.19□□□□□ -1.1
SGMS2-203ENST00000394686 NAA30Q147X3 362 aaPredicted RBP8.19□□□□□ -1.1
SGMS2-203ENST00000394686 TMC7Q7Z402 723 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 SKAP1Q86WV1 359 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 RNF135Q8IUD6 432 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 SPACA7Q96KW9 195 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 CCDC94Q9BW85 323 aaPredicted RBP8.19□□□□□ -1.1
SGMS2-203ENST00000394686 SLC52A1Q9NWF4 448 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
SGMS2-203ENST00000394686 TROQ12816 1431 aaPredicted RBP8.19□□□□□ -1.1
SGMS2-203ENST00000394686 ITSN2Q9NZM3 1697 aa8.18□□□□□ -1.1
SGMS2-203ENST00000394686 TLDC2A0PJX2 215 aa8.18□□□□□ -1.1
SGMS2-203ENST00000394686 FANCCQ00597 558 aa8.18□□□□□ -1.1
SGMS2-203ENST00000394686 EGFLAMQ63HQ2 1017 aa8.18□□□□□ -1.1
SGMS2-203ENST00000394686 GBP4Q96PP9 640 aa8.18□□□□□ -1.1
SGMS2-203ENST00000394686 EGFL7Q9UHF1 273 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms