RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 ARHGEF25Q86VW2 580 aa22.38■■□□□ 1.17
PCDHA1-202ENST00000394633 ZSCAN30Q86W11 494 aa22.38■■□□□ 1.17
PCDHA1-202ENST00000394633 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
PCDHA1-202ENST00000394633 PNMA6EA0A0J9YXQ4 647 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 PRIM1P49642 420 aaKnown RBP22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 IGSF1Q8N6C5 1336 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 CRYBG1Q9Y4K1 1723 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 MX1P20591 662 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 FLIIQ13045 1269 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 IP6K1Q92551 441 aa22.37■■□□□ 1.17
PCDHA1-202ENST00000394633 ATP8B2P98198 1209 aa22.36■■□□□ 1.17
PCDHA1-202ENST00000394633 PALD1Q9ULE6 856 aa22.36■■□□□ 1.17
PCDHA1-202ENST00000394633 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
PCDHA1-202ENST00000394633 GNAI3P08754 354 aa22.35■■□□□ 1.17
PCDHA1-202ENST00000394633 ZC3H6P61129 1189 aaKnown RBP22.35■■□□□ 1.17
PCDHA1-202ENST00000394633 RGPD2P0DJD1 1756 aa22.35■■□□□ 1.17
PCDHA1-202ENST00000394633 FKBP5Q13451 457 aaPredicted RBP22.35■■□□□ 1.17
PCDHA1-202ENST00000394633 CHMLP26374 656 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 MCM2P49736 904 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 CUL4AQ13619 759 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 FOXD4L5Q5VV16 416 aaPredicted RBP22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 FOXD4L4Q8WXT5 416 aaPredicted RBP22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 TMEM63CQ9P1W3 806 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 NSFL1CQ9UNZ2 370 aaKnown RBP22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 NHSL1Q5SYE7 1610 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 RGPD5Q99666 1765 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 AXIN2Q9Y2T1 843 aa22.34■■□□□ 1.17
PCDHA1-202ENST00000394633 CCDC30Q5VVM6 783 aa22.33■■□□□ 1.17
PCDHA1-202ENST00000394633 USHBP1Q8N6Y0 703 aa22.33■■□□□ 1.17
PCDHA1-202ENST00000394633 NECTIN2Q92692 538 aa22.33■■□□□ 1.16
PCDHA1-202ENST00000394633 RILPL2Q969X0 211 aa22.33■■□□□ 1.16
PCDHA1-202ENST00000394633 STAP2Q9UGK3 403 aa22.33■■□□□ 1.16
PCDHA1-202ENST00000394633 BRD1O95696 1058 aa22.32■■□□□ 1.16
PCDHA1-202ENST00000394633 MCCP23508 829 aa22.32■■□□□ 1.16
PCDHA1-202ENST00000394633 PDLIM2Q96JY6 352 aa22.32■■□□□ 1.16
PCDHA1-202ENST00000394633 TRIM6-TRIM34B2RNG4 842 aa22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 HTATSF1O43719 755 aaKnown RBP22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 ANAPC15P60006 121 aa22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 LRSAM1Q6UWE0 723 aa22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 ANO2Q9NQ90 1003 aa22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 LRRFIP2Q9Y608 721 aaKnown RBP22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
PCDHA1-202ENST00000394633 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
PCDHA1-202ENST00000394633 LRRC59Q96AG4 307 aaKnown RBP22.3■■□□□ 1.16
PCDHA1-202ENST00000394633 MSNP26038 577 aaKnown RBP22.3■■□□□ 1.16
PCDHA1-202ENST00000394633 HS1BP3Q53T59 392 aa22.3■■□□□ 1.16
PCDHA1-202ENST00000394633 NBPF6Q5VWK0 638 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 IL17RAQ96F46 866 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 NBPF4Q96M43 638 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 PXDNLA1KZ92 1463 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 SYCE3A1L190 88 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 GNAT3A8MTJ3 354 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 SRCIN1Q9C0H9 1055 aa22.29■■□□□ 1.16
PCDHA1-202ENST00000394633 NOL8Q76FK4 1167 aaKnown RBP22.28■■□□□ 1.16
PCDHA1-202ENST00000394633 INTS4Q96HW7 963 aaKnown RBP22.28■■□□□ 1.16
PCDHA1-202ENST00000394633 MBD3O95983 291 aa22.27■■□□□ 1.16
PCDHA1-202ENST00000394633 TPM2P07951 284 aa22.27■■□□□ 1.16
PCDHA1-202ENST00000394633 USP44Q9H0E7 712 aa22.27■■□□□ 1.16
PCDHA1-202ENST00000394633 OFD1O75665 1012 aa22.27■■□□□ 1.16
PCDHA1-202ENST00000394633 AOX1Q06278 1338 aa22.27■■□□□ 1.15
PCDHA1-202ENST00000394633 RRP9O43818 475 aaKnown RBP22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 IL25Q9H293 177 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 COL18A1P39060 1754 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 HSP90AA2PQ14568 343 aaPredicted RBP22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 TCHHQ07283 1943 aa22.26■■□□□ 1.15
PCDHA1-202ENST00000394633 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 NOL7Q9UMY1 257 aaKnown RBP22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 SOS1Q07889 1333 aaPredicted RBP22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 ANKRD24Q8TF21 1146 aa22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 UPF3BQ9BZI7 483 aaKnown RBP22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 IL1RAPL2Q9NP60 686 aa22.25■■□□□ 1.15
PCDHA1-202ENST00000394633 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
PCDHA1-202ENST00000394633 SSH3Q8TE77 659 aa22.23■■□□□ 1.15
PCDHA1-202ENST00000394633 ERBB3P21860 1342 aa22.23■■□□□ 1.15
PCDHA1-202ENST00000394633 TAF7Q15545 349 aaPredicted RBP22.22■■□□□ 1.15
PCDHA1-202ENST00000394633 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.22■■□□□ 1.15
PCDHA1-202ENST00000394633 NUTM1Q86Y26 1132 aa22.22■■□□□ 1.15
PCDHA1-202ENST00000394633 HSPA4P34932 840 aa22.21■■□□□ 1.15
PCDHA1-202ENST00000394633 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
PCDHA1-202ENST00000394633 EPB41L2O43491 1005 aaKnown RBP22.21■■□□□ 1.15
PCDHA1-202ENST00000394633 ZNF500O60304 480 aaPredicted RBP22.21■■□□□ 1.15
PCDHA1-202ENST00000394633 PHAXQ9H814 394 aaKnown RBP22.21■■□□□ 1.15
PCDHA1-202ENST00000394633 CAMTA1Q9Y6Y1 1673 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 CPDO75976 1380 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 MAP4K4O95819 1239 aaPredicted RBP22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 POLA2Q14181 598 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 HDGFL1Q5TGJ6 251 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 PPP1R42Q7Z4L9 355 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 PI4K2BQ8TCG2 481 aa22.19■■□□□ 1.14
PCDHA1-202ENST00000394633 RAB11FIP3O75154 756 aa22.18■■□□□ 1.14
PCDHA1-202ENST00000394633 NCAPD2Q15021 1401 aa22.18■■□□□ 1.14
PCDHA1-202ENST00000394633 AHDC1Q5TGY3 1603 aaPredicted RBP22.18■■□□□ 1.14
PCDHA1-202ENST00000394633 SURF6O75683 361 aaKnown RBP22.18■■□□□ 1.14
PCDHA1-202ENST00000394633 RNF214Q8ND24 703 aa22.18■■□□□ 1.14
PCDHA1-202ENST00000394633 ZKSCAN5Q9Y2L8 839 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms