RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 MYL6BP14649 208 aa23.85■■□□□ 1.41
CLDND1-203ENST00000394181 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
CLDND1-203ENST00000394181 SEC24BO95487 1268 aa23.85■■□□□ 1.41
CLDND1-203ENST00000394181 SNRPA1P09661 255 aaKnown RBP23.85■■□□□ 1.41
CLDND1-203ENST00000394181 BCL11AQ9H165 835 aa23.85■■□□□ 1.41
CLDND1-203ENST00000394181 MAP3K2Q9Y2U5 619 aa23.85■■□□□ 1.41
CLDND1-203ENST00000394181 PXDNLA1KZ92 1463 aa23.84■■□□□ 1.41
CLDND1-203ENST00000394181 SRCIN1Q9C0H9 1055 aa23.84■■□□□ 1.41
CLDND1-203ENST00000394181 HYPKQ9NX55 129 aa23.84■■□□□ 1.41
CLDND1-203ENST00000394181 LRRFIP2Q9Y608 721 aaKnown RBP23.84■■□□□ 1.41
CLDND1-203ENST00000394181 GNAI3P08754 354 aa23.83■■□□□ 1.41
CLDND1-203ENST00000394181 DISP2A7MBM2 1401 aa23.82■■□□□ 1.4
CLDND1-203ENST00000394181 NBPF7P0C2Y1 421 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-203ENST00000394181 KSR2Q6VAB6 950 aa23.82■■□□□ 1.4
CLDND1-203ENST00000394181 PNMA6EA0A0J9YXQ4 647 aa23.81■■□□□ 1.4
CLDND1-203ENST00000394181 APBB1O00213 710 aa23.81■■□□□ 1.4
CLDND1-203ENST00000394181 PTCD1O75127 700 aaKnown RBP23.8■■□□□ 1.4
CLDND1-203ENST00000394181 ANP32AP39687 249 aaKnown RBP23.8■■□□□ 1.4
CLDND1-203ENST00000394181 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
CLDND1-203ENST00000394181 C16orf71Q8IYS4 520 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-203ENST00000394181 UBTFL1P0CB47 393 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-203ENST00000394181 XAGE3Q8WTP9 111 aa23.79■■□□□ 1.4
CLDND1-203ENST00000394181 GLI3P10071 1580 aa23.79■■□□□ 1.4
CLDND1-203ENST00000394181 SMARCA5O60264 1052 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-203ENST00000394181 CWF19L2Q2TBE0 894 aaKnown RBP23.79■■□□□ 1.4
CLDND1-203ENST00000394181 COPS6Q7L5N1 327 aa23.78■■□□□ 1.4
CLDND1-203ENST00000394181 N4BP2Q86UW6 1770 aaPredicted RBP23.78■■□□□ 1.4
CLDND1-203ENST00000394181 ATP8B2P98198 1209 aa23.77■■□□□ 1.4
CLDND1-203ENST00000394181 TOGARAM1Q9Y4F4 1720 aa23.77■■□□□ 1.4
CLDND1-203ENST00000394181 PIGBQ92521 554 aa23.76■■□□□ 1.39
CLDND1-203ENST00000394181 OTUD7AQ8TE49 926 aaPredicted RBP23.76■■□□□ 1.39
CLDND1-203ENST00000394181 TMOD3Q9NYL9 352 aa23.76■■□□□ 1.39
CLDND1-203ENST00000394181 PLCH1Q4KWH8 1693 aa23.76■■□□□ 1.39
CLDND1-203ENST00000394181 HMMRO75330 724 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 EXOC6BQ9Y2D4 811 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 SPATA31A1Q5TZJ5 1347 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 EXOC5O00471 708 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 ASAP1Q9ULH1 1129 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 KCPQ6ZWJ8 1503 aa23.75■■□□□ 1.39
CLDND1-203ENST00000394181 NBPF26B4DH59 902 aa23.74■■□□□ 1.39
CLDND1-203ENST00000394181 NBPF14Q5TI25 921 aa23.74■■□□□ 1.39
CLDND1-203ENST00000394181 NBPF10Q6P3W6 841 aaKnown RBP23.74■■□□□ 1.39
CLDND1-203ENST00000394181 NBPF15Q8N660 670 aa23.74■■□□□ 1.39
CLDND1-203ENST00000394181 RIC3Q7Z5B4 369 aa23.74■■□□□ 1.39
CLDND1-203ENST00000394181 DDX58O95786 925 aaKnown RBP23.73■■□□□ 1.39
CLDND1-203ENST00000394181 A1BGP04217 495 aa23.72■■□□□ 1.39
CLDND1-203ENST00000394181 IGKV5-2P06315 115 aa23.72■■□□□ 1.39
CLDND1-203ENST00000394181 PLEKHM2Q8IWE5 1019 aa23.72■■□□□ 1.39
CLDND1-203ENST00000394181 IPO9Q96P70 1041 aaKnown RBP23.72■■□□□ 1.39
CLDND1-203ENST00000394181 PPP1R42Q7Z4L9 355 aa23.71■■□□□ 1.39
CLDND1-203ENST00000394181 TNS2Q63HR2 1409 aa23.71■■□□□ 1.39
CLDND1-203ENST00000394181 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
CLDND1-203ENST00000394181 ANKRD13DQ6ZTN6 518 aa23.71■■□□□ 1.39
CLDND1-203ENST00000394181 LINS1Q8NG48 757 aa23.71■■□□□ 1.39
CLDND1-203ENST00000394181 NRAPQ86VF7 1730 aa23.7■■□□□ 1.38
CLDND1-203ENST00000394181 ATG3Q9NT62 314 aa23.7■■□□□ 1.38
CLDND1-203ENST00000394181 C9orf78Q9NZ63 289 aaPredicted RBP23.7■■□□□ 1.38
CLDND1-203ENST00000394181 UBR2Q8IWV8 1755 aa23.7■■□□□ 1.38
CLDND1-203ENST00000394181 PAPPAQ13219 1627 aa23.7■■□□□ 1.38
CLDND1-203ENST00000394181 CCDC9Q9Y3X0 531 aaKnown RBP23.69■■□□□ 1.38
CLDND1-203ENST00000394181 SPATA31A5Q5VU36 1347 aa23.69■■□□□ 1.38
CLDND1-203ENST00000394181 SPATA31A7Q8IWB4 1347 aa23.69■■□□□ 1.38
CLDND1-203ENST00000394181 SSH3Q8TE77 659 aa23.68■■□□□ 1.38
CLDND1-203ENST00000394181 MYD88Q99836 296 aa23.68■■□□□ 1.38
CLDND1-203ENST00000394181 SLIT2O94813 1529 aa23.67■■□□□ 1.38
CLDND1-203ENST00000394181 BMP2KLQ5H9B9 411 aa23.67■■□□□ 1.38
CLDND1-203ENST00000394181 SYTL4Q96C24 671 aaPredicted RBP23.67■■□□□ 1.38
CLDND1-203ENST00000394181 C8orf37Q96NL8 207 aa23.67■■□□□ 1.38
CLDND1-203ENST00000394181 METTL22Q9BUU2 404 aaPredicted RBP23.67■■□□□ 1.38
CLDND1-203ENST00000394181 SRGAP3O43295 1099 aa23.67■■□□□ 1.38
CLDND1-203ENST00000394181 GSPT1P15170 499 aaKnown RBP23.67■■□□□ 1.38
CLDND1-203ENST00000394181 POLA2Q14181 598 aa23.67■■□□□ 1.38
CLDND1-203ENST00000394181 ZBTB47Q9UFB7 747 aaPredicted RBP23.67■■□□□ 1.38
CLDND1-203ENST00000394181 NEURL1BA8MQ27 555 aa23.66■■□□□ 1.38
CLDND1-203ENST00000394181 TTLL7Q6ZT98 887 aa23.66■■□□□ 1.38
CLDND1-203ENST00000394181 GRM8O00222 908 aa23.65■■□□□ 1.38
CLDND1-203ENST00000394181 PRIM1P49642 420 aaKnown RBP23.65■■□□□ 1.38
CLDND1-203ENST00000394181 DDB1Q16531 1140 aa23.65■■□□□ 1.38
CLDND1-203ENST00000394181 KAZALD1Q96I82 304 aa23.65■■□□□ 1.38
CLDND1-203ENST00000394181 JARID2Q92833 1246 aaPredicted RBP23.65■■□□□ 1.38
CLDND1-203ENST00000394181 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
CLDND1-203ENST00000394181 THRAP3Q9Y2W1 955 aaKnown RBP23.65■■□□□ 1.38
CLDND1-203ENST00000394181 LAMB4A4D0S4 1761 aa23.64■■□□□ 1.38
CLDND1-203ENST00000394181 ATP5J2-PTCD1G3V325 749 aa23.64■■□□□ 1.38
CLDND1-203ENST00000394181 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.38
CLDND1-203ENST00000394181 DNAJC10Q8IXB1 793 aa23.64■■□□□ 1.38
CLDND1-203ENST00000394181 SUCLG2Q96I99 432 aa23.64■■□□□ 1.38
CLDND1-203ENST00000394181 IBTKQ9P2D0 1353 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-203ENST00000394181 BCL9O00512 1426 aa23.64■■□□□ 1.37
CLDND1-203ENST00000394181 MARCH10Q8NA82 808 aaPredicted RBP23.64■■□□□ 1.37
CLDND1-203ENST00000394181 NGLY1Q96IV0 654 aa23.64■■□□□ 1.37
CLDND1-203ENST00000394181 SLC4A9Q96Q91 983 aa23.64■■□□□ 1.37
CLDND1-203ENST00000394181 NEXNQ0ZGT2 675 aa23.63■■□□□ 1.37
CLDND1-203ENST00000394181 GCKRQ14397 625 aa23.63■■□□□ 1.37
CLDND1-203ENST00000394181 CERKQ8TCT0 537 aa23.63■■□□□ 1.37
CLDND1-203ENST00000394181 ITGB4P16144 1822 aa23.63■■□□□ 1.37
CLDND1-203ENST00000394181 WNK3Q9BYP7 1800 aa23.63■■□□□ 1.37
CLDND1-203ENST00000394181 LRRCC1Q9C099 1032 aa23.62■■□□□ 1.37
CLDND1-203ENST00000394181 UTYO14607 1347 aa23.62■■□□□ 1.37
CLDND1-203ENST00000394181 JCADQ9P266 1359 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms