RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
CDH11-202ENST00000394156 ZMYM3Q14202 1370 aa10.8□□□□□ -0.68
CDH11-202ENST00000394156 C6orf229H3BNL8 230 aa10.8□□□□□ -0.68
CDH11-202ENST00000394156 POLR3DP05423 398 aaPredicted RBP10.8□□□□□ -0.68
CDH11-202ENST00000394156 LGR6Q9HBX8 967 aa10.8□□□□□ -0.68
CDH11-202ENST00000394156 GRM1Q13255 1194 aa10.8□□□□□ -0.68
CDH11-202ENST00000394156 CCAR1Q8IX12 1150 aaKnown RBP10.8□□□□□ -0.68
CDH11-202ENST00000394156 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
CDH11-202ENST00000394156 KRT18P05783 430 aaKnown RBP10.8□□□□□ -0.68
CDH11-202ENST00000394156 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
CDH11-202ENST00000394156 FAM182BQ5T319 152 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 TNMDQ9H2S6 317 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
CDH11-202ENST00000394156 RXRAP19793 462 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 HSP90AA4PQ58FG1 418 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 UIMC1Q96RL1 719 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 SBNO2Q9Y2G9 1366 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 PZPP20742 1482 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 RPGRQ92834 1020 aaKnown RBP10.79□□□□□ -0.68
CDH11-202ENST00000394156 EYA1Q99502 592 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 UBAC1Q9BSL1 405 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 MYO5CQ9NQX4 1742 aa10.79□□□□□ -0.68
CDH11-202ENST00000394156 RIMBP2O15034 1052 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 TPM1P09493 284 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 TESK2Q96S53 571 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 TBC1D2Q9BYX2 928 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 LRPPRCP42704 1394 aaKnown RBP10.78□□□□□ -0.68
CDH11-202ENST00000394156 ZNF518AQ6AHZ1 1483 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 LDHAL6AQ6ZMR3 332 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 DZIP1Q86YF9 867 aaKnown RBP10.78□□□□□ -0.68
CDH11-202ENST00000394156 ZCRB1Q8TBF4 217 aaKnown RBP10.78□□□□□ -0.68
CDH11-202ENST00000394156 CPA1P15085 419 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 SPATA32Q96LK8 384 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 UHRF1BP1Q6BDS2 1440 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 CKAP2LQ8IYA6 745 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 KLHL10Q6JEL2 608 aa10.78□□□□□ -0.68
CDH11-202ENST00000394156 KCNQ4P56696 695 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 RALGAPBQ86X10 1494 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 ADGBQ8N7X0 1667 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 XBP1P17861 261 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 RFC4P35249 363 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 HSP90AA2PQ14568 343 aaPredicted RBP10.77□□□□□ -0.68
CDH11-202ENST00000394156 IFNL2Q8IZJ0 200 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 OTUD7AQ8TE49 926 aaPredicted RBP10.77□□□□□ -0.68
CDH11-202ENST00000394156 AK7Q96M32 723 aa10.77□□□□□ -0.68
CDH11-202ENST00000394156 SLC3A2P08195 630 aaKnown RBP10.77□□□□□ -0.69
CDH11-202ENST00000394156 ZNF594Q96JF6 807 aaPredicted RBP10.77□□□□□ -0.69
CDH11-202ENST00000394156 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 TANGO6Q9C0B7 1094 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 MKNK2Q9HBH9 465 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 DBF4Q9UBU7 674 aaPredicted RBP10.77□□□□□ -0.69
CDH11-202ENST00000394156 HIP1O00291 1037 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 BIN1O00499 593 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 SERPINC1P01008 464 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 PICALMQ13492 652 aa10.77□□□□□ -0.69
CDH11-202ENST00000394156 ENOX2Q16206 610 aaKnown RBP10.77□□□□□ -0.69
CDH11-202ENST00000394156 IMMTQ16891 758 aaKnown RBP10.76□□□□□ -0.69
CDH11-202ENST00000394156 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
CDH11-202ENST00000394156 CWC25Q9NXE8 425 aaPredicted RBP10.76□□□□□ -0.69
CDH11-202ENST00000394156 RAB11FIP3O75154 756 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 LIG1P18858 919 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 SDSP20132 328 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 AMOTQ4VCS5 1084 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 NACAP1Q9BZK3 213 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 HOOK1Q9UJC3 728 aaKnown RBP10.76□□□□□ -0.69
CDH11-202ENST00000394156 MSH6P52701 1360 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 MIGA1Q8NAN2 632 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 FAM170AA1A519 330 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 NAPBQ9H115 298 aa10.76□□□□□ -0.69
CDH11-202ENST00000394156 ANKRD18BA2A2Z9 1011 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 HYPKQ9NX55 129 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 BICC1Q9H694 974 aaKnown RBP10.75□□□□□ -0.69
CDH11-202ENST00000394156 MATR3P43243 847 aaKnown RBP eCLIP10.75□□□□□ -0.69
CDH11-202ENST00000394156 RBM26Q5T8P6 1007 aaKnown RBP10.75□□□□□ -0.69
CDH11-202ENST00000394156 WDR78Q5VTH9 848 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 CCDC129Q6ZRS4 1044 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 ZKSCAN3Q9BRR0 538 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 MICU3Q86XE3 530 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 MAST1Q9Y2H9 1570 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 RPAP2Q8IXW5 612 aaPredicted RBP10.75□□□□□ -0.69
CDH11-202ENST00000394156 HOXC9P31274 260 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 ALDH1L2Q3SY69 923 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 FAM43AQ8N2R8 423 aa10.75□□□□□ -0.69
CDH11-202ENST00000394156 CCDC47Q96A33 483 aaKnown RBP10.75□□□□□ -0.69
CDH11-202ENST00000394156 KCNQ3O43525 872 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 CRACR2BQ8N4Y2 399 aaPredicted RBP10.74□□□□□ -0.69
CDH11-202ENST00000394156 TTLL12Q14166 644 aaPredicted RBP10.74□□□□□ -0.69
CDH11-202ENST00000394156 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CDH11-202ENST00000394156 GOLGA6L1Q8N7Z2 621 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 GJB2P29033 226 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 SEPT11Q9NVA2 429 aaKnown RBP10.74□□□□□ -0.69
CDH11-202ENST00000394156 ANKRD36BQ8N2N9 1353 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 ZNF213O14771 459 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 GCP02774 474 aa10.74□□□□□ -0.69
CDH11-202ENST00000394156 FILIP1Q7Z7B0 1213 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms