RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 KCNA6P17658 529 aa16.91■□□□□ 0.3
GAPVD1-205ENST00000394084 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
GAPVD1-205ENST00000394084 KCNQ3O43525 872 aa16.9■□□□□ 0.3
GAPVD1-205ENST00000394084 CHPF2Q9P2E5 772 aa16.9■□□□□ 0.3
GAPVD1-205ENST00000394084 RBM33Q96EV2 1170 aaKnown RBP16.9■□□□□ 0.3
GAPVD1-205ENST00000394084 TUBGCP6Q96RT7 1819 aa16.89■□□□□ 0.3
GAPVD1-205ENST00000394084 LRRC37A3O60309 1634 aa16.89■□□□□ 0.3
GAPVD1-205ENST00000394084 MBD3O95983 291 aa16.89■□□□□ 0.3
GAPVD1-205ENST00000394084 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 NWD1Q149M9 1564 aa16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 KIAA1211Q6ZU35 1233 aa16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
GAPVD1-205ENST00000394084 DTNBO60941 627 aa16.88■□□□□ 0.29
GAPVD1-205ENST00000394084 HSPA4P34932 840 aa16.88■□□□□ 0.29
GAPVD1-205ENST00000394084 RAB11FIP3O75154 756 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 SETD1BQ9UPS6 1966 aaKnown RBP16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 POLA2Q14181 598 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 AOX1Q06278 1338 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 UBE2Q2Q8WVN8 375 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
GAPVD1-205ENST00000394084 CPA1P15085 419 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 DNAAF4Q8WXU2 420 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 KIF1BPQ96EK5 621 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 SGSM2O43147 1006 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 HSP90AA2PQ14568 343 aaPredicted RBP16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 SNX14Q9Y5W7 946 aa16.86■□□□□ 0.29
GAPVD1-205ENST00000394084 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 BEND3Q5T5X7 828 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 CNTROBQ8N137 903 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 RAD50Q92878 1312 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.85■□□□□ 0.29
GAPVD1-205ENST00000394084 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 LRRC59Q96AG4 307 aaKnown RBP16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 WDR33Q9C0J8 1336 aaKnown RBP16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 OFD1O75665 1012 aa16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 AK2P54819 239 aa16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 LSG1Q9H089 658 aaKnown RBP16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
GAPVD1-205ENST00000394084 TEFQ10587 303 aa16.83■□□□□ 0.29
GAPVD1-205ENST00000394084 CACNA1FO60840 1977 aa16.83■□□□□ 0.28
GAPVD1-205ENST00000394084 BTBD11A6QL63 1104 aa16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 ZNF530Q6P9A1 599 aaPredicted RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 CNPY2Q9Y2B0 182 aa16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 HS1BP3Q53T59 392 aa16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 SYAP1Q96A49 352 aaPredicted RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
GAPVD1-205ENST00000394084 ARHGAP23Q9P227 1491 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 TPM2P07951 284 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 MPNDQ8N594 471 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 IP6K1Q92551 441 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 CEMIPQ8WUJ3 1361 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 SLIT1O75093 1534 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 DIAPH3Q9NSV4 1193 aa16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 MARF1Q9Y4F3 1742 aaKnown RBP16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
GAPVD1-205ENST00000394084 ANKARQ7Z5J8 1434 aa16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 TTC14Q96N46 770 aa16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 C9orf78Q9NZ63 289 aaPredicted RBP16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 LARGE1O95461 756 aa16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 PTMAP06454 111 aaKnown RBP16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 ZKSCAN5Q9Y2L8 839 aa16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 ADCY9O60503 1353 aa16.8■□□□□ 0.28
GAPVD1-205ENST00000394084 PROSER3Q2NL68 480 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 MAP3K2Q9Y2U5 619 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 TCHHQ07283 1943 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 PTH1RQ03431 593 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 PRAMEF22A3QJZ6 481 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 RRP9O43818 475 aaKnown RBP16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 SYT1P21579 422 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 HSP90AB4PQ58FF6 505 aa16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 PRPF40BQ6NWY9 871 aaKnown RBP16.79■□□□□ 0.28
GAPVD1-205ENST00000394084 FIBPO43427 364 aa16.78■□□□□ 0.28
GAPVD1-205ENST00000394084 GLRX3O76003 335 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms