RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
KRT41P-201ENST00000393988 KCNA3P22001 575 aa16.07■□□□□ 0.16
KRT41P-201ENST00000393988 TM4SF1P30408 202 aa16.07■□□□□ 0.16
KRT41P-201ENST00000393988 PRKAR2BP31323 418 aa16.07■□□□□ 0.16
KRT41P-201ENST00000393988 PHACTR3Q96KR7 559 aa16.07■□□□□ 0.16
KRT41P-201ENST00000393988 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
KRT41P-201ENST00000393988 COL15A1P39059 1388 aa16.06■□□□□ 0.16
KRT41P-201ENST00000393988 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
KRT41P-201ENST00000393988 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
KRT41P-201ENST00000393988 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
KRT41P-201ENST00000393988 NARFQ9UHQ1 456 aa16.06■□□□□ 0.16
KRT41P-201ENST00000393988 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
KRT41P-201ENST00000393988 STARD3NLO95772 234 aa16.05■□□□□ 0.16
KRT41P-201ENST00000393988 U2AF1L5P0DN76 240 aaPredicted RBP16.05■□□□□ 0.16
KRT41P-201ENST00000393988 PPP2R1AP30153 589 aa16.05■□□□□ 0.16
KRT41P-201ENST00000393988 U2AF1Q01081 240 aaKnown RBP eCLIP16.05■□□□□ 0.16
KRT41P-201ENST00000393988 NFIXQ14938 502 aa16.05■□□□□ 0.16
KRT41P-201ENST00000393988 DALRD3Q5D0E6 543 aaKnown RBP16.05■□□□□ 0.16
KRT41P-201ENST00000393988 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
KRT41P-201ENST00000393988 ZNF790Q6PG37 636 aa16.04■□□□□ 0.16
KRT41P-201ENST00000393988 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
KRT41P-201ENST00000393988 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
KRT41P-201ENST00000393988 BTBD11A6QL63 1104 aa16.02■□□□□ 0.16
KRT41P-201ENST00000393988 KCNQ3O43525 872 aa16.02■□□□□ 0.16
KRT41P-201ENST00000393988 SERPINB2P05120 415 aa16.02■□□□□ 0.16
KRT41P-201ENST00000393988 C9orf131Q5VYM1 1079 aa16.02■□□□□ 0.16
KRT41P-201ENST00000393988 TBC1D2BQ9UPU7 963 aa16.02■□□□□ 0.16
KRT41P-201ENST00000393988 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
KRT41P-201ENST00000393988 HEG1Q9ULI3 1381 aa16.01■□□□□ 0.15
KRT41P-201ENST00000393988 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
KRT41P-201ENST00000393988 A0A087WZG4 1122 aa16.01■□□□□ 0.15
KRT41P-201ENST00000393988 MCM10Q7L590 875 aa16.01■□□□□ 0.15
KRT41P-201ENST00000393988 FMNL2Q96PY5 1086 aa16.01■□□□□ 0.15
KRT41P-201ENST00000393988 TEX13AQ9BXU3 409 aaPredicted RBP16.01■□□□□ 0.15
KRT41P-201ENST00000393988 KIF3CO14782 793 aa16■□□□□ 0.15
KRT41P-201ENST00000393988 A1BGP04217 495 aa16■□□□□ 0.15
KRT41P-201ENST00000393988 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
KRT41P-201ENST00000393988 NPM2Q86SE8 214 aaKnown RBP16■□□□□ 0.15
KRT41P-201ENST00000393988 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
KRT41P-201ENST00000393988 AFDNP55196 1824 aaKnown RBP16■□□□□ 0.15
KRT41P-201ENST00000393988 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
KRT41P-201ENST00000393988 DCTN1Q14203 1278 aa15.99■□□□□ 0.15
KRT41P-201ENST00000393988 C2CD5Q86YS7 1000 aa15.99■□□□□ 0.15
KRT41P-201ENST00000393988 CCDC24Q8N4L8 307 aa15.99■□□□□ 0.15
KRT41P-201ENST00000393988 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
KRT41P-201ENST00000393988 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
KRT41P-201ENST00000393988 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
KRT41P-201ENST00000393988 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
KRT41P-201ENST00000393988 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
KRT41P-201ENST00000393988 HSPA6P17066 643 aa15.97■□□□□ 0.15
KRT41P-201ENST00000393988 CEMIPQ8WUJ3 1361 aa15.97■□□□□ 0.15
KRT41P-201ENST00000393988 PRAMEF22A3QJZ6 481 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 H0YIN7 160 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 NPHP1O15259 732 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 RASSF7Q02833 373 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 USP16Q9Y5T5 823 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 CARMIL3Q8ND23 1372 aa15.96■□□□□ 0.15
KRT41P-201ENST00000393988 IL6STP40189 918 aaPredicted RBP15.95■□□□□ 0.14
KRT41P-201ENST00000393988 TTLL6Q8N841 843 aa15.95■□□□□ 0.14
KRT41P-201ENST00000393988 ZNF622Q969S3 477 aaKnown RBP eCLIP15.95■□□□□ 0.14
KRT41P-201ENST00000393988 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
KRT41P-201ENST00000393988 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
KRT41P-201ENST00000393988 MIS18AQ9NYP9 233 aa15.94■□□□□ 0.14
KRT41P-201ENST00000393988 NEFMP07197 916 aa15.93■□□□□ 0.14
KRT41P-201ENST00000393988 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
KRT41P-201ENST00000393988 SETDB2Q96T68 719 aa15.93■□□□□ 0.14
KRT41P-201ENST00000393988 NRXN2Q9P2S2 1712 aa15.93■□□□□ 0.14
KRT41P-201ENST00000393988 TOMM70O94826 608 aa15.92■□□□□ 0.14
KRT41P-201ENST00000393988 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
KRT41P-201ENST00000393988 SNRPA1P09661 255 aaKnown RBP15.92■□□□□ 0.14
KRT41P-201ENST00000393988 PRR5LQ6MZQ0 368 aa15.92■□□□□ 0.14
KRT41P-201ENST00000393988 SBF1O95248 1867 aa15.91■□□□□ 0.14
KRT41P-201ENST00000393988 PDE6BP35913 854 aa15.91■□□□□ 0.14
KRT41P-201ENST00000393988 BRIP1Q9BX63 1249 aa15.91■□□□□ 0.14
KRT41P-201ENST00000393988 RRAGCQ9HB90 399 aa15.91■□□□□ 0.14
KRT41P-201ENST00000393988 KDM2BQ8NHM5 1336 aa15.91■□□□□ 0.14
KRT41P-201ENST00000393988 SCN7AQ01118 1682 aa15.9■□□□□ 0.14
KRT41P-201ENST00000393988 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
KRT41P-201ENST00000393988 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
KRT41P-201ENST00000393988 CNBD1Q8NA66 436 aa15.9■□□□□ 0.14
KRT41P-201ENST00000393988 C21orf2O43822 256 aa15.89■□□□□ 0.13
KRT41P-201ENST00000393988 NGEFQ8N5V2 710 aa15.89■□□□□ 0.13
KRT41P-201ENST00000393988 CEP350Q5VT06 3117 aa15.89■□□□□ 0.13
KRT41P-201ENST00000393988 ANKRD31Q8N7Z5 1873 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 FAM177BA6PVY3 158 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 LMNB1P20700 586 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 PRELPP51888 382 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 ST5P78524 1137 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 NBPF10Q6P3W6 841 aaKnown RBP15.88■□□□□ 0.13
KRT41P-201ENST00000393988 NBPF5PQ86XG9 351 aaPredicted RBP15.88■□□□□ 0.13
KRT41P-201ENST00000393988 NBPF15Q8N660 670 aa15.88■□□□□ 0.13
KRT41P-201ENST00000393988 THUMPD2Q9BTF0 503 aaKnown RBP15.88■□□□□ 0.13
KRT41P-201ENST00000393988 CCDC88AQ3V6T2 1871 aa15.87■□□□□ 0.13
KRT41P-201ENST00000393988 NFKBIEO00221 500 aa15.86■□□□□ 0.13
KRT41P-201ENST00000393988 APLP1P51693 650 aa15.86■□□□□ 0.13
KRT41P-201ENST00000393988 RBM46Q8TBY0 533 aaKnown RBP15.86■□□□□ 0.13
KRT41P-201ENST00000393988 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
KRT41P-201ENST00000393988 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms