RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CUL4AQ13619 759 aa14.08□□□□□ -0.15
R3HDM2-203ENST00000393811 FBXW7Q969H0 707 aa14.08□□□□□ -0.15
R3HDM2-203ENST00000393811 C16orf45Q96MC5 204 aaPredicted RBP14.08□□□□□ -0.15
R3HDM2-203ENST00000393811 TNMDQ9H2S6 317 aa14.08□□□□□ -0.15
R3HDM2-203ENST00000393811 UHRF1BP1LA0JNW5 1464 aa14.08□□□□□ -0.15
R3HDM2-203ENST00000393811 MTHFSDQ2M296 383 aaKnown RBP14.08□□□□□ -0.16
R3HDM2-203ENST00000393811 TPD52L1Q16890 204 aaPredicted RBP14.08□□□□□ -0.16
R3HDM2-203ENST00000393811 TFIP11Q9UBB9 837 aaKnown RBP14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 H3BQV1 296 aa14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 MAP3K11Q16584 847 aa14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 CEBPZQ03701 1054 aaKnown RBP14.07□□□□□ -0.16
R3HDM2-203ENST00000393811 BECN2A8MW95 431 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 RHPN1Q8TCX5 695 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 KIF1BPQ96EK5 621 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 OSBPL3Q9H4L5 887 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 RIMBP3CA6NJZ7 1639 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 RIMBP3BA6NNM3 1639 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 RIMBP3Q9UFD9 1639 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 TCEANC2Q96MN5 208 aa14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 CCDC9Q9Y3X0 531 aaKnown RBP14.06□□□□□ -0.16
R3HDM2-203ENST00000393811 HSP90AB4PQ58FF6 505 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 FAM173BQ6P4H8 233 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 VWDEQ8N2E2 1590 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 DEPDC5O75140 1603 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 SNX14Q9Y5W7 946 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 INO80Q9ULG1 1556 aaPredicted RBP14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 PTGS1P23219 599 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 NLRP6P59044 892 aa14.05□□□□□ -0.16
R3HDM2-203ENST00000393811 RIOK3O14730 519 aaKnown RBP14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 NPHP1O15259 732 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 CCDC186Q7Z3E2 898 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 SPATA32Q96LK8 384 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 BCL2L12Q9HB09 334 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 HSPA4P34932 840 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 EDC4Q6P2E9 1401 aaKnown RBP14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 ATP10DQ9P241 1426 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 RAB11FIP3O75154 756 aa14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
R3HDM2-203ENST00000393811 ACEP12821 1306 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 ANXA1P04083 346 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 LUZP1Q86V48 1076 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 ZSCAN31Q96LW9 406 aaPredicted RBP14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 TTC21BQ7Z4L5 1316 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 GNAT3A8MTJ3 354 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 PDCP20941 246 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 PODXL2Q9NZ53 605 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 ARAP3Q8WWN8 1544 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 GLRX3O76003 335 aaKnown RBP14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 TEFQ10587 303 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 RASEFQ8IZ41 740 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 FSD1Q9BTV5 496 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 ABCC3O15438 1527 aa14.03□□□□□ -0.16
R3HDM2-203ENST00000393811 TNNT1P13805 278 aa14.02□□□□□ -0.16
R3HDM2-203ENST00000393811 U2AF2P26368 475 aaKnown RBP eCLIP14.02□□□□□ -0.162e-6■■■■□ 20.8
R3HDM2-203ENST00000393811 RNF20Q5VTR2 975 aa14.02□□□□□ -0.16
R3HDM2-203ENST00000393811 PYCARDQ9ULZ3 195 aa14.02□□□□□ -0.16
R3HDM2-203ENST00000393811 RGS12O14924 1447 aa14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 KIAA0232Q92628 1395 aa14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 SOS1Q07889 1333 aaPredicted RBP14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 SGSM2O43147 1006 aa14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 LMOD2Q6P5Q4 547 aa14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 AACSQ86V21 672 aa14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 PHAXQ9H814 394 aaKnown RBP14.02□□□□□ -0.17
R3HDM2-203ENST00000393811 USP32Q8NFA0 1604 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 BLOC1S2Q6QNY1 142 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 DACT1Q9NYF0 836 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 PSMA5P28066 241 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 FILIP1Q7Z7B0 1213 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 FAM200AQ8TCP9 573 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 SIL1Q9H173 461 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 RAD50Q92878 1312 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 ANO6Q4KMQ2 910 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 USHBP1Q8N6Y0 703 aa14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 SH2B1Q9NRF2 756 aaPredicted RBP14.01□□□□□ -0.17
R3HDM2-203ENST00000393811 ZC3H13Q5T200 1668 aaKnown RBP14□□□□□ -0.17
R3HDM2-203ENST00000393811 MAP3K19Q56UN5 1328 aa14□□□□□ -0.17
R3HDM2-203ENST00000393811 CDK11BP21127 795 aaKnown RBP14□□□□□ -0.17
R3HDM2-203ENST00000393811 TYRO3Q06418 890 aa14□□□□□ -0.17
R3HDM2-203ENST00000393811 AIMP1Q12904 312 aaKnown RBP14□□□□□ -0.17
R3HDM2-203ENST00000393811 DDX11Q96FC9 970 aa14□□□□□ -0.17
R3HDM2-203ENST00000393811 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
R3HDM2-203ENST00000393811 MROH1Q8NDA8 1641 aa14□□□□□ -0.17
R3HDM2-203ENST00000393811 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 USP44Q9H0E7 712 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 PPP6R1Q9UPN7 881 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 ZNF165P49910 485 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 SLC26A8Q96RN1 970 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 IL25Q9H293 177 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 CLIP2Q9UDT6 1046 aa13.99□□□□□ -0.17
R3HDM2-203ENST00000393811 NRDCO43847 1150 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms