RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
SFXN3-202ENST00000393459 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
SFXN3-202ENST00000393459 CHMLP26374 656 aa17.45■□□□□ 0.38
SFXN3-202ENST00000393459 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
SFXN3-202ENST00000393459 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
SFXN3-202ENST00000393459 ARID5BQ14865 1188 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
SFXN3-202ENST00000393459 LTV1Q96GA3 475 aaPredicted RBP17.44■□□□□ 0.38
SFXN3-202ENST00000393459 TRIM5Q9C035 493 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 ST7Q9NRC1 585 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 RTL1A6NKG5 1358 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 HMMRO75330 724 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 KCNJ4P48050 445 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 HMGN5P82970 282 aaKnown RBP17.44■□□□□ 0.38
SFXN3-202ENST00000393459 ARHGAP45Q92619 1136 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 TSPYL4Q9UJ04 414 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 WDR33Q9C0J8 1336 aaKnown RBP17.44■□□□□ 0.38
SFXN3-202ENST00000393459 ANXA1P04083 346 aa17.44■□□□□ 0.38
SFXN3-202ENST00000393459 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
SFXN3-202ENST00000393459 STX6O43752 255 aa17.43■□□□□ 0.38
SFXN3-202ENST00000393459 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
SFXN3-202ENST00000393459 EIF2S2P20042 333 aaKnown RBP17.43■□□□□ 0.38
SFXN3-202ENST00000393459 OS9Q13438 667 aaPredicted RBP17.43■□□□□ 0.38
SFXN3-202ENST00000393459 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
SFXN3-202ENST00000393459 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
SFXN3-202ENST00000393459 TXNDC2Q86VQ3 553 aa17.42■□□□□ 0.38
SFXN3-202ENST00000393459 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 GJB2P29033 226 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 DDX11Q96FC9 970 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 PRIMPOLQ96LW4 560 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
SFXN3-202ENST00000393459 IL13P35225 146 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 TPD52L1Q16890 204 aaPredicted RBP17.41■□□□□ 0.38
SFXN3-202ENST00000393459 FILIP1Q7Z7B0 1213 aa17.41■□□□□ 0.38
SFXN3-202ENST00000393459 LIG1P18858 919 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 ZSCAN22P10073 491 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-202ENST00000393459 TNNT1P13805 278 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
SFXN3-202ENST00000393459 COG3Q96JB2 828 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 ZFP91Q96JP5 570 aaPredicted RBP17.4■□□□□ 0.38
SFXN3-202ENST00000393459 TMEM2Q9UHN6 1383 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 LRRC7Q96NW7 1537 aa17.4■□□□□ 0.38
SFXN3-202ENST00000393459 ADCK5Q3MIX3 580 aa17.39■□□□□ 0.38
SFXN3-202ENST00000393459 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.38
SFXN3-202ENST00000393459 GNAI2P04899 355 aa17.39■□□□□ 0.37
SFXN3-202ENST00000393459 NAP1L2Q9ULW6 460 aaPredicted RBP17.39■□□□□ 0.37
SFXN3-202ENST00000393459 KIAA1524Q8TCG1 905 aa17.39■□□□□ 0.37
SFXN3-202ENST00000393459 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
SFXN3-202ENST00000393459 RUFY3Q7L099 469 aa17.38■□□□□ 0.37
SFXN3-202ENST00000393459 GORABQ5T7V8 394 aa17.38■□□□□ 0.37
SFXN3-202ENST00000393459 ZNF853P0CG23 659 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 ANO6Q4KMQ2 910 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 CHMP4AQ9BY43 222 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 UBR1Q8IWV7 1749 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 ATP10DQ9P241 1426 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 F13A1P00488 732 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 CDK11BP21127 795 aaKnown RBP17.37■□□□□ 0.37
SFXN3-202ENST00000393459 SIRT1Q96EB6 747 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 DIAPH3Q9NSV4 1193 aa17.37■□□□□ 0.37
SFXN3-202ENST00000393459 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
SFXN3-202ENST00000393459 DACT1Q9NYF0 836 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 UBE2HP62256 183 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 FGD1P98174 961 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 NCBP1Q09161 790 aaKnown RBP17.36■□□□□ 0.37
SFXN3-202ENST00000393459 METP08581 1390 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 PTCH1Q13635 1447 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 MED14O60244 1454 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 USP27XA6NNY8 438 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 CUL4AQ13619 759 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 BICD2Q8TD16 824 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 SNX14Q9Y5W7 946 aa17.36■□□□□ 0.37
SFXN3-202ENST00000393459 PTPN21Q16825 1174 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 TECPR2O15040 1411 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 LARP1BQ659C4 914 aaKnown RBP17.34■□□□□ 0.37
SFXN3-202ENST00000393459 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 FMNL2Q96PY5 1086 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 RPAP1Q9BWH6 1393 aaPredicted RBP17.34■□□□□ 0.37
SFXN3-202ENST00000393459 CD163L1Q9NR16 1453 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 FAM184AQ8NB25 1140 aa17.34■□□□□ 0.37
SFXN3-202ENST00000393459 PHAXQ9H814 394 aaKnown RBP17.34■□□□□ 0.37
SFXN3-202ENST00000393459 CCDC192P0DO97 292 aa17.33■□□□□ 0.37
SFXN3-202ENST00000393459 PTH1RQ03431 593 aa17.33■□□□□ 0.37
SFXN3-202ENST00000393459 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.37
SFXN3-202ENST00000393459 SRGAP3O43295 1099 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 EIF4A2Q14240 407 aaKnown RBP17.33■□□□□ 0.36
SFXN3-202ENST00000393459 TTC6Q86TZ1 520 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 CCDC112Q8NEF3 446 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 LRRC2Q9BYS8 371 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 TMX1Q9H3N1 280 aa17.33■□□□□ 0.36
SFXN3-202ENST00000393459 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
SFXN3-202ENST00000393459 MCM2P49736 904 aa17.32■□□□□ 0.36
SFXN3-202ENST00000393459 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
SFXN3-202ENST00000393459 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms