RNA–Protein interactions for RNA: ENST00000393370.6

PTPA-207, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-207ENST00000393370 LRRC8AQ8IWT6 810 aa20.3■□□□□ 0.84
PTPA-207ENST00000393370 PHACTR3Q96KR7 559 aa20.3■□□□□ 0.84
PTPA-207ENST00000393370 NUP62CLQ9H1M0 184 aa20.29■□□□□ 0.84
PTPA-207ENST00000393370 TRMT1Q9NXH9 659 aaKnown RBP20.29■□□□□ 0.84
PTPA-207ENST00000393370 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
PTPA-207ENST00000393370 PNMA6AP0CW24 399 aaPredicted RBP20.29■□□□□ 0.84
PTPA-207ENST00000393370 CLCN6P51797 869 aa20.29■□□□□ 0.84
PTPA-207ENST00000393370 GNAI1P63096 354 aa20.29■□□□□ 0.84
PTPA-207ENST00000393370 IL17RAQ96F46 866 aa20.29■□□□□ 0.84
PTPA-207ENST00000393370 ZC3H13Q5T200 1668 aaKnown RBP20.29■□□□□ 0.84
PTPA-207ENST00000393370 TRIM66O15016 1216 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 FCHSD2O94868 740 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 LIG1P18858 919 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 MEIS3Q99687 375 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 PLCH2O75038 1416 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 POLR3GO15318 223 aaPredicted RBP20.28■□□□□ 0.84
PTPA-207ENST00000393370 KRBA2Q6ZNG9 492 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 IL25Q9H293 177 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 YY1AP1Q9H869 796 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 CABP2Q9NPB3 220 aa20.28■□□□□ 0.84
PTPA-207ENST00000393370 LRRN4CLQ8ND94 238 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 SMC3Q9UQE7 1217 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 LRRC7Q96NW7 1537 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 DHX16O60231 1041 aaKnown RBP20.27■□□□□ 0.84
PTPA-207ENST00000393370 MUM1L1Q5H9M0 696 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 POLKQ9UBT6 870 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 LCMT1Q9UIC8 334 aa20.27■□□□□ 0.84
PTPA-207ENST00000393370 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 C10orf67Q8IYJ2 551 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 MSH6P52701 1360 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 GYS2P54840 703 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 TDRD7Q8NHU6 1098 aaKnown RBP20.26■□□□□ 0.83
PTPA-207ENST00000393370 MTMR6Q9Y217 621 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 SKILP12757 684 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 ST5P78524 1137 aa20.26■□□□□ 0.83
PTPA-207ENST00000393370 SOX12O15370 315 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 AK2P54819 239 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 MLECQ14165 292 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 NFE2L2Q16236 605 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 EXOC6BQ9Y2D4 811 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 MYO1CO00159 1063 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 HTATSF1O43719 755 aaKnown RBP20.25■□□□□ 0.83
PTPA-207ENST00000393370 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 RUFY3Q7L099 469 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 TTC6Q86TZ1 520 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 TNMDQ9H2S6 317 aa20.25■□□□□ 0.83
PTPA-207ENST00000393370 GEMIN8Q9NWZ8 242 aaKnown RBP20.25■□□□□ 0.83
PTPA-207ENST00000393370 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 HSPA4P34932 840 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 TEX35Q5T0J7 233 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 TXLNBQ8N3L3 684 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 DNAJC5Q9H3Z4 198 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.24■□□□□ 0.83
PTPA-207ENST00000393370 HMOX1P09601 288 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 SMARCE1Q969G3 411 aa20.24■□□□□ 0.83
PTPA-207ENST00000393370 EVC2Q86UK5 1308 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 SSH2Q76I76 1423 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 FYB1O15117 783 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 ZNF165P49910 485 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 UNC5CLQ8IV45 518 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 TTC14Q96N46 770 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 DACT1Q9NYF0 836 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 LARGE1O95461 756 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 DNAJC25Q9H1X3 360 aa20.23■□□□□ 0.83
PTPA-207ENST00000393370 LRRFIP2Q9Y608 721 aaKnown RBP20.23■□□□□ 0.83
PTPA-207ENST00000393370 NEURL4Q96JN8 1562 aa20.22■□□□□ 0.83
PTPA-207ENST00000393370 GJB2P29033 226 aa20.22■□□□□ 0.83
PTPA-207ENST00000393370 CCAR2Q8N163 923 aaKnown RBP20.22■□□□□ 0.83
PTPA-207ENST00000393370 ZCCHC11Q5TAX3 1644 aaKnown RBP20.22■□□□□ 0.83
PTPA-207ENST00000393370 SALL3Q9BXA9 1300 aa20.22■□□□□ 0.83
PTPA-207ENST00000393370 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
PTPA-207ENST00000393370 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
PTPA-207ENST00000393370 PNPLA6Q8IY17 1366 aa20.21■□□□□ 0.83
PTPA-207ENST00000393370 VPS37CA5D8V6 355 aaPredicted RBP20.21■□□□□ 0.83
PTPA-207ENST00000393370 ZRANB2O95218 330 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPA-207ENST00000393370 CDC25BP30305 580 aa20.21■□□□□ 0.83
PTPA-207ENST00000393370 GTF2A1P52655 376 aaPredicted RBP20.21■□□□□ 0.83
PTPA-207ENST00000393370 ARHGAP29Q52LW3 1261 aa20.21■□□□□ 0.83
PTPA-207ENST00000393370 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
PTPA-207ENST00000393370 LOC102724159A0A0B4J2E5 919 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CCZ1BP86790 482 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CCZ1P86791 482 aaPredicted RBP20.2■□□□□ 0.82
PTPA-207ENST00000393370 PWP2Q15269 919 aaKnown RBP20.2■□□□□ 0.82
PTPA-207ENST00000393370 ZSCAN26Q16670 478 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CCDC191Q8NCU4 936 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 ZCCHC17Q9NP64 241 aaKnown RBP20.2■□□□□ 0.82
PTPA-207ENST00000393370 TET3O43151 1660 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 TULP4Q9NRJ4 1543 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CASQ1P31415 396 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CCDC83Q8IWF9 413 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 C14orf93Q9H972 538 aaKnown RBP20.2■□□□□ 0.82
PTPA-207ENST00000393370 L2HGDHQ9H9P8 463 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 AATKQ6ZMQ8 1374 aa20.2■□□□□ 0.82
PTPA-207ENST00000393370 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 TPM4P67936 248 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 FAM173BQ6P4H8 233 aa20.19■□□□□ 0.82
PTPA-207ENST00000393370 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
PTPA-207ENST00000393370 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms