RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 BCL9LQ86UU0 1499 aa22.03■■□□□ 1.12
MBD4-202ENST00000393278 PDIA6Q15084 440 aa22.03■■□□□ 1.12
MBD4-202ENST00000393278 NGLY1Q96IV0 654 aa22.03■■□□□ 1.12
MBD4-202ENST00000393278 MEIS3Q99687 375 aa22.03■■□□□ 1.12
MBD4-202ENST00000393278 TMOD3Q9NYL9 352 aa22.03■■□□□ 1.12
MBD4-202ENST00000393278 LAMB4A4D0S4 1761 aa22.02■■□□□ 1.12
MBD4-202ENST00000393278 HSPA1LP34931 641 aa22.01■■□□□ 1.11
MBD4-202ENST00000393278 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
MBD4-202ENST00000393278 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
MBD4-202ENST00000393278 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
MBD4-202ENST00000393278 DDB1Q16531 1140 aa22.01■■□□□ 1.11
MBD4-202ENST00000393278 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
MBD4-202ENST00000393278 ADCY9O60503 1353 aa22■■□□□ 1.11
MBD4-202ENST00000393278 PI4KAP2A4QPH2 592 aa22■■□□□ 1.11
MBD4-202ENST00000393278 VPS72Q15906 364 aa22■■□□□ 1.11
MBD4-202ENST00000393278 SIRT2Q8IXJ6 389 aa22■■□□□ 1.11
MBD4-202ENST00000393278 PI4KAP1Q8N8J0 262 aa22■■□□□ 1.11
MBD4-202ENST00000393278 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
MBD4-202ENST00000393278 ATP10DQ9P241 1426 aa22■■□□□ 1.11
MBD4-202ENST00000393278 PDZRN3Q9UPQ7 1066 aa21.99■■□□□ 1.11
MBD4-202ENST00000393278 ITGB4P16144 1822 aa21.99■■□□□ 1.11
MBD4-202ENST00000393278 PIGBQ92521 554 aa21.98■■□□□ 1.11
MBD4-202ENST00000393278 BCL9O00512 1426 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 GNAI3P08754 354 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 RGS3P49796 1198 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 KSR2Q6VAB6 950 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 RPAP2Q8IXW5 612 aaPredicted RBP21.97■■□□□ 1.11
MBD4-202ENST00000393278 ANKRD44Q8N8A2 993 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 SRCIN1Q9C0H9 1055 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 ERBB4Q15303 1308 aa21.97■■□□□ 1.11
MBD4-202ENST00000393278 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.96■■□□□ 1.11
MBD4-202ENST00000393278 BEND3Q5T5X7 828 aa21.96■■□□□ 1.11
MBD4-202ENST00000393278 CEP85Q6P2H3 762 aa21.96■■□□□ 1.11
MBD4-202ENST00000393278 LRP10Q7Z4F1 713 aa21.96■■□□□ 1.11
MBD4-202ENST00000393278 DDX58O95786 925 aaKnown RBP21.95■■□□□ 1.1
MBD4-202ENST00000393278 PTCD1O75127 700 aaKnown RBP21.95■■□□□ 1.1
MBD4-202ENST00000393278 MYL6BP14649 208 aa21.95■■□□□ 1.1
MBD4-202ENST00000393278 GCC1Q96CN9 775 aa21.95■■□□□ 1.1
MBD4-202ENST00000393278 ATG3Q9NT62 314 aa21.95■■□□□ 1.1
MBD4-202ENST00000393278 MAP3K2Q9Y2U5 619 aa21.95■■□□□ 1.1
MBD4-202ENST00000393278 DOT1LQ8TEK3 1739 aa21.94■■□□□ 1.1
MBD4-202ENST00000393278 GNAI2P04899 355 aa21.94■■□□□ 1.1
MBD4-202ENST00000393278 USP44Q9H0E7 712 aa21.94■■□□□ 1.1
MBD4-202ENST00000393278 ASAP1Q9ULH1 1129 aa21.94■■□□□ 1.1
MBD4-202ENST00000393278 MARCH10Q8NA82 808 aaPredicted RBP21.93■■□□□ 1.1
MBD4-202ENST00000393278 USP21Q9UK80 565 aa21.93■■□□□ 1.1
MBD4-202ENST00000393278 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
MBD4-202ENST00000393278 XAGE3Q8WTP9 111 aa21.92■■□□□ 1.1
MBD4-202ENST00000393278 RBM19Q9Y4C8 960 aaKnown RBP21.92■■□□□ 1.1
MBD4-202ENST00000393278 NUCB1Q02818 461 aa21.91■■□□□ 1.1
MBD4-202ENST00000393278 FAM98CQ17RN3 349 aaKnown RBP21.91■■□□□ 1.1
MBD4-202ENST00000393278 COPS6Q7L5N1 327 aa21.91■■□□□ 1.1
MBD4-202ENST00000393278 VSIG10Q8N0Z9 540 aa21.91■■□□□ 1.1
MBD4-202ENST00000393278 ALDH1L1O75891 902 aa21.91■■□□□ 1.1
MBD4-202ENST00000393278 MEX3CQ5U5Q3 659 aaKnown RBP21.91■■□□□ 1.1
MBD4-202ENST00000393278 PRIM1P49642 420 aaKnown RBP21.9■■□□□ 1.1
MBD4-202ENST00000393278 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.1
MBD4-202ENST00000393278 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.1
MBD4-202ENST00000393278 SYTL4Q96C24 671 aaPredicted RBP21.89■■□□□ 1.1
MBD4-202ENST00000393278 DCTPP1Q9H773 170 aa21.89■■□□□ 1.1
MBD4-202ENST00000393278 NBPF26B4DH59 902 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 NBPF14Q5TI25 921 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 NBPF10Q6P3W6 841 aaKnown RBP21.88■■□□□ 1.09
MBD4-202ENST00000393278 RIC3Q7Z5B4 369 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 NBPF15Q8N660 670 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 TEX13AQ9BXU3 409 aaPredicted RBP21.88■■□□□ 1.09
MBD4-202ENST00000393278 HMMRO75330 724 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 PDE4AP27815 886 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 LINS1Q8NG48 757 aa21.88■■□□□ 1.09
MBD4-202ENST00000393278 IBTKQ9P2D0 1353 aaPredicted RBP21.87■■□□□ 1.09
MBD4-202ENST00000393278 ANKRD13DQ6ZTN6 518 aa21.87■■□□□ 1.09
MBD4-202ENST00000393278 CHD1LQ86WJ1 897 aa21.87■■□□□ 1.09
MBD4-202ENST00000393278 BACH2Q9BYV9 841 aa21.87■■□□□ 1.09
MBD4-202ENST00000393278 LRRFIP2Q9Y608 721 aaKnown RBP21.87■■□□□ 1.09
MBD4-202ENST00000393278 A1BGP04217 495 aa21.86■■□□□ 1.09
MBD4-202ENST00000393278 THSD7AQ9UPZ6 1657 aa21.86■■□□□ 1.09
MBD4-202ENST00000393278 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
MBD4-202ENST00000393278 AFF2P51816 1311 aa21.85■■□□□ 1.09
MBD4-202ENST00000393278 NBPF7P0C2Y1 421 aaPredicted RBP21.85■■□□□ 1.09
MBD4-202ENST00000393278 ANKRD45Q5TZF3 282 aa21.85■■□□□ 1.09
MBD4-202ENST00000393278 DNAJC10Q8IXB1 793 aa21.85■■□□□ 1.09
MBD4-202ENST00000393278 METTL22Q9BUU2 404 aaPredicted RBP21.85■■□□□ 1.09
MBD4-202ENST00000393278 ATP8B2P98198 1209 aa21.84■■□□□ 1.09
MBD4-202ENST00000393278 NEXNQ0ZGT2 675 aa21.84■■□□□ 1.09
MBD4-202ENST00000393278 CWF19L2Q2TBE0 894 aaKnown RBP21.84■■□□□ 1.09
MBD4-202ENST00000393278 PLBD2Q8NHP8 589 aa21.84■■□□□ 1.09
MBD4-202ENST00000393278 LNPKQ9C0E8 428 aa21.84■■□□□ 1.09
MBD4-202ENST00000393278 KAT6BQ8WYB5 2073 aa21.84■■□□□ 1.09
MBD4-202ENST00000393278 IGKV5-2P06315 115 aa21.83■■□□□ 1.09
MBD4-202ENST00000393278 FAM161AQ3B820 660 aa21.83■■□□□ 1.09
MBD4-202ENST00000393278 ACSBG1Q96GR2 724 aa21.83■■□□□ 1.09
MBD4-202ENST00000393278 SLC4A9Q96Q91 983 aa21.83■■□□□ 1.09
MBD4-202ENST00000393278 ARFGEF2Q9Y6D5 1785 aa21.83■■□□□ 1.08
MBD4-202ENST00000393278 STARD3NLO95772 234 aa21.82■■□□□ 1.08
MBD4-202ENST00000393278 ATRNO75882 1429 aa21.82■■□□□ 1.08
MBD4-202ENST00000393278 UTYO14607 1347 aa21.82■■□□□ 1.08
MBD4-202ENST00000393278 GJD4Q96KN9 370 aaPredicted RBP21.82■■□□□ 1.08
MBD4-202ENST00000393278 MYD88Q99836 296 aa21.82■■□□□ 1.08
MBD4-202ENST00000393278 C9orf78Q9NZ63 289 aaPredicted RBP21.82■■□□□ 1.08
MBD4-202ENST00000393278 PNMA6EA0A0J9YXQ4 647 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms