RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 FCHSD2O94868 740 aa11.22□□□□□ -0.61
CASP4-201ENST00000393150 SLIT3O75094 1523 aa11.22□□□□□ -0.61
CASP4-201ENST00000393150 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
CASP4-201ENST00000393150 HIC1Q14526 733 aa11.21□□□□□ -0.61
CASP4-201ENST00000393150 TSR1Q2NL82 804 aaKnown RBP11.21□□□□□ -0.61
CASP4-201ENST00000393150 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
CASP4-201ENST00000393150 ARHGEF28Q8N1W1 1705 aaKnown RBP11.21□□□□□ -0.62
CASP4-201ENST00000393150 CDAN1Q8IWY9 1227 aa11.2□□□□□ -0.62
CASP4-201ENST00000393150 ANKRD24Q8TF21 1146 aa11.2□□□□□ -0.62
CASP4-201ENST00000393150 SHANK3Q9BYB0 1731 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 ERBB3P21860 1342 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 NHSQ6T4R5 1651 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 MAP3K7O43318 606 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 TOMM70O94826 608 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 MSL1Q68DK7 614 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 ZNF710Q8N1W2 664 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 KTN1Q86UP2 1357 aaKnown RBP11.19□□□□□ -0.62
CASP4-201ENST00000393150 USP47Q96K76 1375 aa11.19□□□□□ -0.62
CASP4-201ENST00000393150 ABCC6O95255 1503 aa11.18□□□□□ -0.62
CASP4-201ENST00000393150 TRIM66O15016 1216 aa11.18□□□□□ -0.62
CASP4-201ENST00000393150 MAP2K5Q13163 448 aa11.18□□□□□ -0.62
CASP4-201ENST00000393150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.18□□□□□ -0.62
CASP4-201ENST00000393150 FBXW7Q969H0 707 aa11.18□□□□□ -0.62
CASP4-201ENST00000393150 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
CASP4-201ENST00000393150 IRF6O14896 467 aa11.17□□□□□ -0.62
CASP4-201ENST00000393150 HOXB1P14653 301 aaPredicted RBP11.17□□□□□ -0.62
CASP4-201ENST00000393150 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
CASP4-201ENST00000393150 HDGFL2Q7Z4V5 671 aaPredicted RBP11.17□□□□□ -0.62
CASP4-201ENST00000393150 COL23A1Q86Y22 540 aaPredicted RBP11.17□□□□□ -0.62
CASP4-201ENST00000393150 TNS4Q8IZW8 715 aa11.17□□□□□ -0.62
CASP4-201ENST00000393150 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
CASP4-201ENST00000393150 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
CASP4-201ENST00000393150 KCNQ4P56696 695 aa11.16□□□□□ -0.62
CASP4-201ENST00000393150 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
CASP4-201ENST00000393150 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
CASP4-201ENST00000393150 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
CASP4-201ENST00000393150 ANKRD36BQ8N2N9 1353 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 BTAF1O14981 1849 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 SNPHO15079 494 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 CCDC102AQ96A19 550 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
CASP4-201ENST00000393150 TRPM1Q7Z4N2 1603 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 COL18A1P39060 1754 aa11.15□□□□□ -0.62
CASP4-201ENST00000393150 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
CASP4-201ENST00000393150 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
CASP4-201ENST00000393150 TMC1Q8TDI8 760 aa11.14□□□□□ -0.63
CASP4-201ENST00000393150 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
CASP4-201ENST00000393150 IGSF1Q8N6C5 1336 aa11.14□□□□□ -0.63
CASP4-201ENST00000393150 PRELPP51888 382 aa11.13□□□□□ -0.63
CASP4-201ENST00000393150 SMARCC1Q92922 1105 aaPredicted RBP11.13□□□□□ -0.63
CASP4-201ENST00000393150 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
CASP4-201ENST00000393150 ADCY9O60503 1353 aa11.13□□□□□ -0.63
CASP4-201ENST00000393150 AMPHP49418 695 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 PDE4DQ08499 809 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 FSTL1Q12841 308 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 DNAJC5GQ8N7S2 189 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 IP6K1Q92551 441 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 KLRG1Q96E93 195 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 KIAA1210Q9ULL0 1709 aa11.12□□□□□ -0.63
CASP4-201ENST00000393150 RGPD5Q99666 1765 aa11.11□□□□□ -0.63
CASP4-201ENST00000393150 ST18O60284 1047 aa11.11□□□□□ -0.63
CASP4-201ENST00000393150 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
CASP4-201ENST00000393150 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
CASP4-201ENST00000393150 WWC3Q9ULE0 1092 aa11.11□□□□□ -0.63
CASP4-201ENST00000393150 PIK3C2AO00443 1686 aa11.11□□□□□ -0.63
CASP4-201ENST00000393150 TMEM132AQ24JP5 1023 aa11.1□□□□□ -0.63
CASP4-201ENST00000393150 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
CASP4-201ENST00000393150 KDM2BQ8NHM5 1336 aa11.1□□□□□ -0.63
CASP4-201ENST00000393150 USP31Q70CQ4 1352 aa11.1□□□□□ -0.63
CASP4-201ENST00000393150 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 NFAT5O94916 1531 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 TATP17735 454 aaPredicted RBP11.09□□□□□ -0.63
CASP4-201ENST00000393150 TGFB2P61812 414 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 NME9Q86XW9 330 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 COG3Q96JB2 828 aa11.09□□□□□ -0.63
CASP4-201ENST00000393150 SSFA2P28290 1259 aa11.08□□□□□ -0.64
CASP4-201ENST00000393150 AMHR2Q16671 573 aa11.08□□□□□ -0.64
CASP4-201ENST00000393150 JMYQ8N9B5 988 aa11.08□□□□□ -0.64
CASP4-201ENST00000393150 TTC13Q8NBP0 860 aa11.08□□□□□ -0.64
CASP4-201ENST00000393150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
CASP4-201ENST00000393150 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
CASP4-201ENST00000393150 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
CASP4-201ENST00000393150 SMG6Q86US8 1419 aaKnown RBP11.06□□□□□ -0.64
CASP4-201ENST00000393150 COL24A1Q17RW2 1714 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 SMC1BQ8NDV3 1235 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 KDM4CQ9H3R0 1056 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 CCDC87Q9NVE4 849 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 PLEKHG2Q9H7P9 1386 aa11.06□□□□□ -0.64
CASP4-201ENST00000393150 COL9A1P20849 921 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms