RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 PIBF1Q8WXW3 757 aa13.91□□□□□ -0.18
PDCD4-202ENST00000393104 INTS4Q96HW7 963 aaKnown RBP13.91□□□□□ -0.18
PDCD4-202ENST00000393104 C1orf167Q5SNV9 1468 aa13.91□□□□□ -0.18
PDCD4-202ENST00000393104 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
PDCD4-202ENST00000393104 MCM10Q7L590 875 aa13.91□□□□□ -0.18
PDCD4-202ENST00000393104 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
PDCD4-202ENST00000393104 ST18O60284 1047 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 ST3GAL1Q11201 340 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 TTC14Q96N46 770 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 MAP7D2Q96T17 732 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 APBB1O00213 710 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
PDCD4-202ENST00000393104 NHSL1Q5SYE7 1610 aa13.9□□□□□ -0.18
PDCD4-202ENST00000393104 F6X3S4 739 aa13.89□□□□□ -0.19
PDCD4-202ENST00000393104 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
PDCD4-202ENST00000393104 SRCIN1Q9C0H9 1055 aa13.89□□□□□ -0.19
PDCD4-202ENST00000393104 TTC12Q9H892 705 aaPredicted RBP13.89□□□□□ -0.19
PDCD4-202ENST00000393104 DMTNQ08495 405 aa13.89□□□□□ -0.19
PDCD4-202ENST00000393104 FKBP5Q13451 457 aaPredicted RBP13.89□□□□□ -0.19
PDCD4-202ENST00000393104 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
PDCD4-202ENST00000393104 DTNBO60941 627 aa13.88□□□□□ -0.19
PDCD4-202ENST00000393104 STAP2Q9UGK3 403 aa13.88□□□□□ -0.19
PDCD4-202ENST00000393104 PTPRCP08575 1304 aa13.88□□□□□ -0.19
PDCD4-202ENST00000393104 CSPP1Q1MSJ5 1256 aa13.88□□□□□ -0.19
PDCD4-202ENST00000393104 TSPY26PQ9H489 355 aa13.88□□□□□ -0.19
PDCD4-202ENST00000393104 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 REC8O95072 547 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 MBD3O95983 291 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 LMO7Q8WWI1 1683 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
PDCD4-202ENST00000393104 USP25Q9UHP3 1055 aa13.87□□□□□ -0.19
PDCD4-202ENST00000393104 FOXO3O43524 673 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 COG3Q96JB2 828 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 ARID3AQ99856 593 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 UPF3BQ9BZI7 483 aaKnown RBP13.86□□□□□ -0.19
PDCD4-202ENST00000393104 PYCARDQ9ULZ3 195 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 LARGE1O95461 756 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
PDCD4-202ENST00000393104 CACNA1FO60840 1977 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 UTP14CQ5TAP6 766 aaKnown RBP13.86□□□□□ -0.19
PDCD4-202ENST00000393104 RASEFQ8IZ41 740 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
PDCD4-202ENST00000393104 HSPA4P34932 840 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 ANAPC15P60006 121 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 ABCA3Q99758 1704 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 ANKRD7Q92527 254 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 C19orf44Q9H6X5 657 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 SBNO1A3KN83 1393 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 KIAA1524Q8TCG1 905 aa13.85□□□□□ -0.19
PDCD4-202ENST00000393104 ANP32BQ92688 251 aaKnown RBP13.85□□□□□ -0.19
PDCD4-202ENST00000393104 PXDNQ92626 1479 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 KIAA2012Q0VF49 1180 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 FOXD4L6Q3SYB3 417 aaPredicted RBP13.84□□□□□ -0.19
PDCD4-202ENST00000393104 FOXD4L3Q6VB84 417 aaPredicted RBP13.84□□□□□ -0.19
PDCD4-202ENST00000393104 RUFY3Q7L099 469 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 PI4K2BQ8TCG2 481 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 ADCY5O95622 1261 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 CTIFO43310 598 aaKnown RBP13.84□□□□□ -0.19
PDCD4-202ENST00000393104 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
PDCD4-202ENST00000393104 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
PDCD4-202ENST00000393104 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
PDCD4-202ENST00000393104 COL18A1P39060 1754 aa13.83□□□□□ -0.2
PDCD4-202ENST00000393104 ZHX1Q9UKY1 873 aaPredicted RBP13.83□□□□□ -0.2
PDCD4-202ENST00000393104 ARHGEF10O15013 1369 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 UVSSAQ2YD98 709 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 ZBTB7CA1YPR0 619 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 KDM4AO75164 1064 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 MX1P20591 662 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
PDCD4-202ENST00000393104 NOL8Q76FK4 1167 aaKnown RBP13.82□□□□□ -0.2
PDCD4-202ENST00000393104 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
PDCD4-202ENST00000393104 LARP6Q9BRS8 491 aaKnown RBP13.82□□□□□ -0.2
PDCD4-202ENST00000393104 LTBP4Q8N2S1 1624 aa13.81□□□□□ -0.2
PDCD4-202ENST00000393104 PRIMPOLQ96LW4 560 aa13.81□□□□□ -0.2
PDCD4-202ENST00000393104 SNX14Q9Y5W7 946 aa13.81□□□□□ -0.2
PDCD4-202ENST00000393104 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
PDCD4-202ENST00000393104 KDRP35968 1356 aa13.81□□□□□ -0.2
PDCD4-202ENST00000393104 PROSER2Q86WR7 435 aaPredicted RBP13.8□□□□□ -0.2
PDCD4-202ENST00000393104 MAP3K19Q56UN5 1328 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 FLT4P35916 1363 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 SYT1P21579 422 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 MTERF4Q7Z6M4 381 aaKnown RBP13.8□□□□□ -0.2
PDCD4-202ENST00000393104 MCM2P49736 904 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 ATP8B2P98198 1209 aa13.8□□□□□ -0.2
PDCD4-202ENST00000393104 CPA1P15085 419 aa13.79□□□□□ -0.2
PDCD4-202ENST00000393104 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
PDCD4-202ENST00000393104 COL22A1Q8NFW1 1626 aaPredicted RBP13.79□□□□□ -0.2
PDCD4-202ENST00000393104 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
PDCD4-202ENST00000393104 AK2P54819 239 aa13.78□□□□□ -0.2
PDCD4-202ENST00000393104 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
PDCD4-202ENST00000393104 NGDNQ8NEJ9 315 aaKnown RBP13.78□□□□□ -0.2
PDCD4-202ENST00000393104 RAD50Q92878 1312 aa13.78□□□□□ -0.2
PDCD4-202ENST00000393104 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms