RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 IFNL2Q8IZJ0 200 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 CHPF2Q9P2E5 772 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 WDR17Q8IZU2 1322 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 HEG1Q9ULI3 1381 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 BMP2KLQ5H9B9 411 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 ANKRD44Q8N8A2 993 aa22.62■■□□□ 1.21
TRAF3-203ENST00000392745 PRAMEF22A3QJZ6 481 aa22.61■■□□□ 1.21
TRAF3-203ENST00000392745 GIGYF1O75420 1035 aaPredicted RBP22.61■■□□□ 1.21
TRAF3-203ENST00000392745 CEP85Q6P2H3 762 aa22.61■■□□□ 1.21
TRAF3-203ENST00000392745 TRIM44Q96DX7 344 aaPredicted RBP22.6■■□□□ 1.21
TRAF3-203ENST00000392745 RBM42Q9BTD8 480 aaKnown RBP22.6■■□□□ 1.21
TRAF3-203ENST00000392745 RPAP2Q8IXW5 612 aaPredicted RBP22.6■■□□□ 1.21
TRAF3-203ENST00000392745 NFATC2IPQ8NCF5 419 aa22.6■■□□□ 1.21
TRAF3-203ENST00000392745 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
TRAF3-203ENST00000392745 ANXA1P04083 346 aa22.59■■□□□ 1.21
TRAF3-203ENST00000392745 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
TRAF3-203ENST00000392745 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
TRAF3-203ENST00000392745 PKD1L3Q7Z443 1732 aa22.59■■□□□ 1.21
TRAF3-203ENST00000392745 SLC39A6Q13433 755 aa22.59■■□□□ 1.21
TRAF3-203ENST00000392745 HSP90AA2PQ14568 343 aaPredicted RBP22.59■■□□□ 1.21
TRAF3-203ENST00000392745 DCTPP1Q9H773 170 aa22.59■■□□□ 1.21
TRAF3-203ENST00000392745 SKOR2Q2VWA4 1001 aaPredicted RBP22.57■■□□□ 1.2
TRAF3-203ENST00000392745 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
TRAF3-203ENST00000392745 TBC1D9Q6ZT07 1266 aa22.57■■□□□ 1.2
TRAF3-203ENST00000392745 K7ELQ4 463 aaPredicted RBP22.56■■□□□ 1.2
TRAF3-203ENST00000392745 SSFA2P28290 1259 aa22.56■■□□□ 1.2
TRAF3-203ENST00000392745 ZNF790Q6PG37 636 aa22.56■■□□□ 1.2
TRAF3-203ENST00000392745 DCAF5Q96JK2 942 aa22.56■■□□□ 1.2
TRAF3-203ENST00000392745 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
TRAF3-203ENST00000392745 STRN4Q9NRL3 753 aa22.55■■□□□ 1.2
TRAF3-203ENST00000392745 PROSER3Q2NL68 480 aa22.54■■□□□ 1.2
TRAF3-203ENST00000392745 LARP1Q6PKG0 1096 aaKnown RBP22.54■■□□□ 1.2
TRAF3-203ENST00000392745 DBF4Q9UBU7 674 aaPredicted RBP22.54■■□□□ 1.2
TRAF3-203ENST00000392745 N4BP2Q86UW6 1770 aaPredicted RBP22.54■■□□□ 1.2
TRAF3-203ENST00000392745 RRP9O43818 475 aaKnown RBP22.54■■□□□ 1.2
TRAF3-203ENST00000392745 ROBO1Q9Y6N7 1651 aa22.53■■□□□ 1.2
TRAF3-203ENST00000392745 PXDNLA1KZ92 1463 aa22.53■■□□□ 1.2
TRAF3-203ENST00000392745 GLIPR1L2Q4G1C9 344 aa22.53■■□□□ 1.2
TRAF3-203ENST00000392745 CARD10Q9BWT7 1032 aa22.53■■□□□ 1.2
TRAF3-203ENST00000392745 USP44Q9H0E7 712 aa22.53■■□□□ 1.2
TRAF3-203ENST00000392745 PI4KAP2A4QPH2 592 aa22.52■■□□□ 1.2
TRAF3-203ENST00000392745 GNAI2P04899 355 aa22.52■■□□□ 1.2
TRAF3-203ENST00000392745 PI4KAP1Q8N8J0 262 aa22.52■■□□□ 1.2
TRAF3-203ENST00000392745 EVA1CP58658 441 aa22.51■■□□□ 1.19
TRAF3-203ENST00000392745 ZCRB1Q8TBF4 217 aaKnown RBP22.51■■□□□ 1.19
TRAF3-203ENST00000392745 GNAI3P08754 354 aa22.51■■□□□ 1.19
TRAF3-203ENST00000392745 PTMSP20962 102 aa22.51■■□□□ 1.19
TRAF3-203ENST00000392745 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
TRAF3-203ENST00000392745 LTBP4Q8N2S1 1624 aa22.5■■□□□ 1.19
TRAF3-203ENST00000392745 MRC1P22897 1456 aa22.5■■□□□ 1.19
TRAF3-203ENST00000392745 DNAAF4Q8WXU2 420 aa22.5■■□□□ 1.19
TRAF3-203ENST00000392745 ZNF496Q96IT1 587 aaPredicted RBP22.5■■□□□ 1.19
TRAF3-203ENST00000392745 AK9Q5TCS8 1911 aa22.5■■□□□ 1.19
TRAF3-203ENST00000392745 ADCY9O60503 1353 aa22.49■■□□□ 1.19
TRAF3-203ENST00000392745 IL2RBP14784 551 aa22.49■■□□□ 1.19
TRAF3-203ENST00000392745 BEND3Q5T5X7 828 aa22.49■■□□□ 1.19
TRAF3-203ENST00000392745 SRCIN1Q9C0H9 1055 aa22.49■■□□□ 1.19
TRAF3-203ENST00000392745 C5P01031 1676 aa22.48■■□□□ 1.19
TRAF3-203ENST00000392745 PDIA6Q15084 440 aa22.48■■□□□ 1.19
TRAF3-203ENST00000392745 NASPP49321 788 aaPredicted RBP22.48■■□□□ 1.19
TRAF3-203ENST00000392745 CABP4P57796 275 aa22.48■■□□□ 1.19
TRAF3-203ENST00000392745 C16orf71Q8IYS4 520 aaPredicted RBP22.48■■□□□ 1.19
TRAF3-203ENST00000392745 VSIG10Q8N0Z9 540 aa22.48■■□□□ 1.19
TRAF3-203ENST00000392745 BAG4O95429 457 aaKnown RBP22.47■■□□□ 1.19
TRAF3-203ENST00000392745 LRRFIP2Q9Y608 721 aaKnown RBP22.47■■□□□ 1.19
TRAF3-203ENST00000392745 DDX49Q9Y6V7 483 aaKnown RBP22.47■■□□□ 1.19
TRAF3-203ENST00000392745 PCDH11XQ9BZA7 1347 aa22.47■■□□□ 1.19
TRAF3-203ENST00000392745 PCDH11YQ9BZA8 1340 aa22.47■■□□□ 1.19
TRAF3-203ENST00000392745 BTG4Q9NY30 223 aa22.47■■□□□ 1.19
TRAF3-203ENST00000392745 PNMA6EA0A0J9YXQ4 647 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 HMMRO75330 724 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 CCDC173Q0VFZ6 552 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 GOLGA6L22H0YM25 854 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 APBB1O00213 710 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 PPP1R9BQ96SB3 815 aa22.46■■□□□ 1.19
TRAF3-203ENST00000392745 DDX21Q9NR30 783 aaKnown RBP eCLIP22.46■■□□□ 1.19
TRAF3-203ENST00000392745 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
TRAF3-203ENST00000392745 ATP8B2P98198 1209 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 KLHL40Q2TBA0 621 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 PLEKHM2Q8IWE5 1019 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 HYPKQ9NX55 129 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 UBTFL1P0CB47 393 aaPredicted RBP22.45■■□□□ 1.18
TRAF3-203ENST00000392745 CLEC17AQ6ZS10 378 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 MAP3K2Q9Y2U5 619 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 USP16Q9Y5T5 823 aa22.45■■□□□ 1.18
TRAF3-203ENST00000392745 SHANK3Q9BYB0 1731 aa22.44■■□□□ 1.18
TRAF3-203ENST00000392745 CDC45O75419 566 aa22.44■■□□□ 1.18
TRAF3-203ENST00000392745 NBPF7P0C2Y1 421 aaPredicted RBP22.44■■□□□ 1.18
TRAF3-203ENST00000392745 GSPT1P15170 499 aaKnown RBP22.44■■□□□ 1.18
TRAF3-203ENST00000392745 TTC5Q8N0Z6 440 aa22.44■■□□□ 1.18
TRAF3-203ENST00000392745 DDX54Q8TDD1 881 aaKnown RBP22.44■■□□□ 1.18
TRAF3-203ENST00000392745 AHDC1Q5TGY3 1603 aaPredicted RBP22.44■■□□□ 1.18
TRAF3-203ENST00000392745 KSR2Q6VAB6 950 aa22.43■■□□□ 1.18
TRAF3-203ENST00000392745 OTUD7AQ8TE49 926 aaPredicted RBP22.43■■□□□ 1.18
TRAF3-203ENST00000392745 NKX1-1Q15270 411 aaPredicted RBP22.42■■□□□ 1.18
TRAF3-203ENST00000392745 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
TRAF3-203ENST00000392745 AIMP1Q12904 312 aaKnown RBP22.41■■□□□ 1.18
TRAF3-203ENST00000392745 FMNL2Q96PY5 1086 aa22.41■■□□□ 1.18
TRAF3-203ENST00000392745 EXOC6BQ9Y2D4 811 aa22.41■■□□□ 1.18
TRAF3-203ENST00000392745 MYL6BP14649 208 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms