RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ATP8B2P98198 1209 aa24.94■■□□□ 1.58
PTPN11-202ENST00000392597 PLEKHM2Q8IWE5 1019 aa24.94■■□□□ 1.58
PTPN11-202ENST00000392597 HYPKQ9NX55 129 aa24.94■■□□□ 1.58
PTPN11-202ENST00000392597 NRAPQ86VF7 1730 aa24.94■■□□□ 1.58
PTPN11-202ENST00000392597 UBTFL1P0CB47 393 aaPredicted RBP24.93■■□□□ 1.58
PTPN11-202ENST00000392597 PI4KAP2A4QPH2 592 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 BEND3Q5T5X7 828 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 PI4KAP1Q8N8J0 262 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 ADCY9O60503 1353 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 NFATC2IPQ8NCF5 419 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 CARD10Q9BWT7 1032 aa24.92■■□□□ 1.58
PTPN11-202ENST00000392597 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.91■■□□□ 1.58
PTPN11-202ENST00000392597 BCL9LQ86UU0 1499 aa24.91■■□□□ 1.58
PTPN11-202ENST00000392597 TOM1L2Q6ZVM7 507 aa24.91■■□□□ 1.58
PTPN11-202ENST00000392597 DDX21Q9NR30 783 aaKnown RBP eCLIP24.91■■□□□ 1.58
PTPN11-202ENST00000392597 LRRFIP2Q9Y608 721 aaKnown RBP24.9■■□□□ 1.58
PTPN11-202ENST00000392597 PCDH11XQ9BZA7 1347 aa24.9■■□□□ 1.58
PTPN11-202ENST00000392597 PCDH11YQ9BZA8 1340 aa24.9■■□□□ 1.58
PTPN11-202ENST00000392597 EIF5BO60841 1220 aaKnown RBP24.89■■□□□ 1.58
PTPN11-202ENST00000392597 EVA1CP58658 441 aa24.89■■□□□ 1.58
PTPN11-202ENST00000392597 C5P01031 1676 aa24.89■■□□□ 1.58
PTPN11-202ENST00000392597 MYT1Q01538 1121 aa24.89■■□□□ 1.57
PTPN11-202ENST00000392597 BECN1Q14457 450 aa24.89■■□□□ 1.57
PTPN11-202ENST00000392597 UNC5CLQ8IV45 518 aa24.89■■□□□ 1.57
PTPN11-202ENST00000392597 C22orf23Q9BZE7 217 aa24.89■■□□□ 1.57
PTPN11-202ENST00000392597 STRN4Q9NRL3 753 aa24.89■■□□□ 1.57
PTPN11-202ENST00000392597 MFAP1P55081 439 aaKnown RBP24.88■■□□□ 1.57
PTPN11-202ENST00000392597 KSR2Q6VAB6 950 aa24.88■■□□□ 1.57
PTPN11-202ENST00000392597 ALDH1L1O75891 902 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 ANXA1P04083 346 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 TTC22Q5TAA0 569 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 ZCRB1Q8TBF4 217 aaKnown RBP24.87■■□□□ 1.57
PTPN11-202ENST00000392597 AFF2P51816 1311 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 SLC39A6Q13433 755 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 USP21Q9UK80 565 aa24.87■■□□□ 1.57
PTPN11-202ENST00000392597 IBTKQ9P2D0 1353 aaPredicted RBP24.86■■□□□ 1.57
PTPN11-202ENST00000392597 PRAMEF22A3QJZ6 481 aa24.86■■□□□ 1.57
PTPN11-202ENST00000392597 DDX58O95786 925 aaKnown RBP24.86■■□□□ 1.57
PTPN11-202ENST00000392597 PROSER3Q2NL68 480 aa24.86■■□□□ 1.57
PTPN11-202ENST00000392597 TTC5Q8N0Z6 440 aa24.86■■□□□ 1.57
PTPN11-202ENST00000392597 PNMA6EA0A0J9YXQ4 647 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 CDC45O75419 566 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 GSPT1P15170 499 aaKnown RBP24.85■■□□□ 1.57
PTPN11-202ENST00000392597 LARP1Q6PKG0 1096 aaKnown RBP24.85■■□□□ 1.57
PTPN11-202ENST00000392597 SSH3Q8TE77 659 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 CABP4P57796 275 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 PDIA6Q15084 440 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 OSBPL3Q9H4L5 887 aa24.85■■□□□ 1.57
PTPN11-202ENST00000392597 SNRPA1P09661 255 aaKnown RBP24.84■■□□□ 1.57
PTPN11-202ENST00000392597 IL2RBP14784 551 aa24.84■■□□□ 1.57
PTPN11-202ENST00000392597 C16orf71Q8IYS4 520 aaPredicted RBP24.84■■□□□ 1.57
PTPN11-202ENST00000392597 FMNL2Q96PY5 1086 aa24.84■■□□□ 1.57
PTPN11-202ENST00000392597 HDAC5Q9UQL6 1122 aa24.84■■□□□ 1.57
PTPN11-202ENST00000392597 MAP3K2Q9Y2U5 619 aa24.84■■□□□ 1.57
PTPN11-202ENST00000392597 SMARCA5O60264 1052 aaPredicted RBP24.83■■□□□ 1.57
PTPN11-202ENST00000392597 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
PTPN11-202ENST00000392597 TBC1D9Q6ZT07 1266 aa24.83■■□□□ 1.57
PTPN11-202ENST00000392597 ZNF496Q96IT1 587 aaPredicted RBP24.83■■□□□ 1.57
PTPN11-202ENST00000392597 LRRCC1Q9C099 1032 aa24.83■■□□□ 1.57
PTPN11-202ENST00000392597 RBM25P49756 843 aaKnown RBP24.83■■□□□ 1.56
PTPN11-202ENST00000392597 POLA2Q14181 598 aa24.83■■□□□ 1.56
PTPN11-202ENST00000392597 ERVV-2B6SEH9 535 aa24.82■■□□□ 1.56
PTPN11-202ENST00000392597 SLC4A3P48751 1232 aa24.82■■□□□ 1.56
PTPN11-202ENST00000392597 SHANK3Q9BYB0 1731 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 LAMB4A4D0S4 1761 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 VPS72Q15906 364 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 EXOC6BQ9Y2D4 811 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 APBB1O00213 710 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 LINS1Q8NG48 757 aa24.81■■□□□ 1.56
PTPN11-202ENST00000392597 OTUD7AQ8TE49 926 aaPredicted RBP24.81■■□□□ 1.56
PTPN11-202ENST00000392597 NBPF7P0C2Y1 421 aaPredicted RBP24.8■■□□□ 1.56
PTPN11-202ENST00000392597 GLI3P10071 1580 aa24.8■■□□□ 1.56
PTPN11-202ENST00000392597 RAB11FIP3O75154 756 aa24.79■■□□□ 1.56
PTPN11-202ENST00000392597 SALL3Q9BXA9 1300 aa24.79■■□□□ 1.56
PTPN11-202ENST00000392597 MTX1Q13505 466 aa24.79■■□□□ 1.56
PTPN11-202ENST00000392597 ZNF772Q68DY9 489 aaPredicted RBP24.79■■□□□ 1.56
PTPN11-202ENST00000392597 PPP1R42Q7Z4L9 355 aa24.79■■□□□ 1.56
PTPN11-202ENST00000392597 SPATA31A1Q5TZJ5 1347 aa24.78■■□□□ 1.56
PTPN11-202ENST00000392597 SPATA31A5Q5VU36 1347 aa24.78■■□□□ 1.56
PTPN11-202ENST00000392597 SPATA31A7Q8IWB4 1347 aa24.78■■□□□ 1.56
PTPN11-202ENST00000392597 TRPC5Q9UL62 973 aaPredicted RBP24.78■■□□□ 1.56
PTPN11-202ENST00000392597 UBR2Q8IWV8 1755 aa24.78■■□□□ 1.56
PTPN11-202ENST00000392597 ATRNO75882 1429 aa24.77■■□□□ 1.56
PTPN11-202ENST00000392597 PDE1AP54750 535 aa24.77■■□□□ 1.56
PTPN11-202ENST00000392597 PAPPAQ13219 1627 aa24.77■■□□□ 1.56
PTPN11-202ENST00000392597 UTYO14607 1347 aa24.77■■□□□ 1.56
PTPN11-202ENST00000392597 ERBB4Q15303 1308 aa24.76■■□□□ 1.55
PTPN11-202ENST00000392597 THRAP3Q9Y2W1 955 aaKnown RBP24.76■■□□□ 1.55
PTPN11-202ENST00000392597 SDSP20132 328 aa24.75■■□□□ 1.55
PTPN11-202ENST00000392597 C9orf78Q9NZ63 289 aaPredicted RBP24.75■■□□□ 1.55
PTPN11-202ENST00000392597 USP35Q9P2H5 1018 aa24.75■■□□□ 1.55
PTPN11-202ENST00000392597 SRGAP3O43295 1099 aa24.75■■□□□ 1.55
PTPN11-202ENST00000392597 HSP90AB4PQ58FF6 505 aa24.75■■□□□ 1.55
PTPN11-202ENST00000392597 LRP10Q7Z4F1 713 aa24.75■■□□□ 1.55
PTPN11-202ENST00000392597 CCDC9Q9Y3X0 531 aaKnown RBP24.75■■□□□ 1.55
PTPN11-202ENST00000392597 AOX1Q06278 1338 aa24.74■■□□□ 1.55
PTPN11-202ENST00000392597 STAP2Q9UGK3 403 aa24.74■■□□□ 1.55
PTPN11-202ENST00000392597 USP16Q9Y5T5 823 aa24.74■■□□□ 1.55
PTPN11-202ENST00000392597 CASC1Q6TDU7 716 aa24.73■■□□□ 1.55
PTPN11-202ENST00000392597 RIC3Q7Z5B4 369 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms