RNA–Protein interactions for RNA: ENST00000392270.3

RAET1E-203, retinoic acid early transcript 1E, humanhuman

TSL 2

Gene RAET1E, Length 743 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAET1E-203ENST00000392270 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
RAET1E-203ENST00000392270 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
RAET1E-203ENST00000392270 RIMBP2O15034 1052 aa12.65□□□□□ -0.38
RAET1E-203ENST00000392270 KIF7Q2M1P5 1343 aa12.64□□□□□ -0.39
RAET1E-203ENST00000392270 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
RAET1E-203ENST00000392270 GGNBP2Q9H3C7 697 aa12.64□□□□□ -0.39
RAET1E-203ENST00000392270 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
RAET1E-203ENST00000392270 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
RAET1E-203ENST00000392270 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
RAET1E-203ENST00000392270 UBR3Q6ZT12 1888 aa12.62□□□□□ -0.39
RAET1E-203ENST00000392270 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
RAET1E-203ENST00000392270 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
RAET1E-203ENST00000392270 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
RAET1E-203ENST00000392270 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
RAET1E-203ENST00000392270 FYB1O15117 783 aa12.6□□□□□ -0.39
RAET1E-203ENST00000392270 HSP90AB2PQ58FF8 381 aa12.6□□□□□ -0.39
RAET1E-203ENST00000392270 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
RAET1E-203ENST00000392270 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
RAET1E-203ENST00000392270 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
RAET1E-203ENST00000392270 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
RAET1E-203ENST00000392270 TATP17735 454 aaPredicted RBP12.59□□□□□ -0.39
RAET1E-203ENST00000392270 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
RAET1E-203ENST00000392270 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
RAET1E-203ENST00000392270 ZNF526Q8TF50 670 aaPredicted RBP12.59□□□□□ -0.39
RAET1E-203ENST00000392270 KNSTRNQ9Y448 316 aa12.59□□□□□ -0.39
RAET1E-203ENST00000392270 SMG6Q86US8 1419 aaKnown RBP12.59□□□□□ -0.39
RAET1E-203ENST00000392270 CGNL1Q0VF96 1302 aa12.59□□□□□ -0.39
RAET1E-203ENST00000392270 MAP2P11137 1827 aaKnown RBP12.58□□□□□ -0.4
RAET1E-203ENST00000392270 GRIN3BO60391 1043 aa12.58□□□□□ -0.4
RAET1E-203ENST00000392270 PHF14O94880 888 aa12.58□□□□□ -0.4
RAET1E-203ENST00000392270 MFRPQ9BY79 579 aa12.58□□□□□ -0.4
RAET1E-203ENST00000392270 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
RAET1E-203ENST00000392270 CYP27B1O15528 508 aa12.57□□□□□ -0.4
RAET1E-203ENST00000392270 PANK3Q9H999 370 aa12.57□□□□□ -0.4
RAET1E-203ENST00000392270 PCDH11XQ9BZA7 1347 aa12.57□□□□□ -0.4
RAET1E-203ENST00000392270 PCDH11YQ9BZA8 1340 aa12.57□□□□□ -0.4
RAET1E-203ENST00000392270 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
RAET1E-203ENST00000392270 INSRP06213 1382 aa12.56□□□□□ -0.4
RAET1E-203ENST00000392270 FLT4P35916 1363 aa12.56□□□□□ -0.4
RAET1E-203ENST00000392270 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
RAET1E-203ENST00000392270 AK7Q96M32 723 aa12.55□□□□□ -0.4
RAET1E-203ENST00000392270 EMILIN1Q9Y6C2 1016 aa12.55□□□□□ -0.4
RAET1E-203ENST00000392270 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 N4BP2Q86UW6 1770 aaPredicted RBP12.54□□□□□ -0.4
RAET1E-203ENST00000392270 ZNF687Q8N1G0 1237 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 PIGBQ92521 554 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 STK24Q9Y6E0 443 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 ADCY9O60503 1353 aa12.54□□□□□ -0.4
RAET1E-203ENST00000392270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
RAET1E-203ENST00000392270 KIF3CO14782 793 aa12.53□□□□□ -0.4
RAET1E-203ENST00000392270 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
RAET1E-203ENST00000392270 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
RAET1E-203ENST00000392270 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
RAET1E-203ENST00000392270 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
RAET1E-203ENST00000392270 KIAA1551Q9HCM1 1747 aa12.53□□□□□ -0.4
RAET1E-203ENST00000392270 IFFO2Q5TF58 517 aa12.52□□□□□ -0.41
RAET1E-203ENST00000392270 FLAD1Q8NFF5 587 aa12.52□□□□□ -0.41
RAET1E-203ENST00000392270 ITPK1Q13572 414 aa12.51□□□□□ -0.41
RAET1E-203ENST00000392270 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
RAET1E-203ENST00000392270 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 SIK1P57059 783 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
RAET1E-203ENST00000392270 ARSIQ5FYB1 569 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 ASAP1Q9ULH1 1129 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 NCAPD2Q15021 1401 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 KIF13BQ9NQT8 1826 aa12.5□□□□□ -0.41
RAET1E-203ENST00000392270 STK25O00506 426 aa12.49□□□□□ -0.41
RAET1E-203ENST00000392270 GNPATO15228 680 aa12.49□□□□□ -0.41
RAET1E-203ENST00000392270 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
RAET1E-203ENST00000392270 KIF24Q5T7B8 1368 aa12.48□□□□□ -0.41
RAET1E-203ENST00000392270 NPC1L1Q9UHC9 1359 aa12.48□□□□□ -0.41
RAET1E-203ENST00000392270 NKX1-1Q15270 411 aaPredicted RBP12.48□□□□□ -0.41
RAET1E-203ENST00000392270 MORC1Q86VD1 984 aa12.48□□□□□ -0.41
RAET1E-203ENST00000392270 EYA1Q99502 592 aa12.48□□□□□ -0.41
RAET1E-203ENST00000392270 TMOD3Q9NYL9 352 aa12.48□□□□□ -0.41
RAET1E-203ENST00000392270 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
RAET1E-203ENST00000392270 HSPA6P17066 643 aa12.47□□□□□ -0.41
RAET1E-203ENST00000392270 SSFA2P28290 1259 aa12.47□□□□□ -0.41
RAET1E-203ENST00000392270 ATP6V1AP38606 617 aa12.47□□□□□ -0.41
RAET1E-203ENST00000392270 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
RAET1E-203ENST00000392270 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
RAET1E-203ENST00000392270 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
RAET1E-203ENST00000392270 PXDNLA1KZ92 1463 aa12.46□□□□□ -0.41
RAET1E-203ENST00000392270 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
RAET1E-203ENST00000392270 MMP10P09238 476 aa12.46□□□□□ -0.41
RAET1E-203ENST00000392270 PHKG2P15735 406 aa12.46□□□□□ -0.41
RAET1E-203ENST00000392270 ATG3Q9NT62 314 aa12.46□□□□□ -0.41
RAET1E-203ENST00000392270 MYH14Q7Z406 1995 aaKnown RBP12.46□□□□□ -0.41
RAET1E-203ENST00000392270 RGL2O15211 777 aa12.45□□□□□ -0.42
RAET1E-203ENST00000392270 TNNT2P45379 298 aaPredicted RBP12.45□□□□□ -0.42
RAET1E-203ENST00000392270 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAET1E-203ENST00000392270 SLC4A9Q96Q91 983 aa12.45□□□□□ -0.42
RAET1E-203ENST00000392270 A0A0G2JLW4 131 aa12.44□□□□□ -0.42
RAET1E-203ENST00000392270 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
RAET1E-203ENST00000392270 PER1O15534 1290 aaPredicted RBP12.44□□□□□ -0.42
RAET1E-203ENST00000392270 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
RAET1E-203ENST00000392270 CC2D1BQ5T0F9 858 aaKnown RBP12.44□□□□□ -0.42
RAET1E-203ENST00000392270 POLKQ9UBT6 870 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms