RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 ZPR1O75312 459 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 TRAK2O60296 914 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 PRPF40AO75400 957 aaKnown RBP19.75■□□□□ 0.75
SNX9-201ENST00000392185 PRPF40BQ6NWY9 871 aaKnown RBP19.75■□□□□ 0.75
SNX9-201ENST00000392185 ECHDC1Q9NTX5 307 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 GRM8O00222 908 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 LDHAL6AQ6ZMR3 332 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 LARP6Q9BRS8 491 aaKnown RBP19.75■□□□□ 0.75
SNX9-201ENST00000392185 LRP2BPQ9P2M1 347 aa19.75■□□□□ 0.75
SNX9-201ENST00000392185 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
SNX9-201ENST00000392185 CHAF1AQ13111 956 aaPredicted RBP19.74■□□□□ 0.75
SNX9-201ENST00000392185 CLSTN1O94985 981 aa19.74■□□□□ 0.75
SNX9-201ENST00000392185 LMBR1LQ6UX01 489 aa19.74■□□□□ 0.75
SNX9-201ENST00000392185 ZNF652Q9Y2D9 606 aa19.74■□□□□ 0.75
SNX9-201ENST00000392185 LMTK3Q96Q04 1460 aa19.74■□□□□ 0.75
SNX9-201ENST00000392185 RAI14Q9P0K7 980 aa19.73■□□□□ 0.75
SNX9-201ENST00000392185 IQGAP3Q86VI3 1631 aa19.73■□□□□ 0.75
SNX9-201ENST00000392185 TEX13AQ9BXU3 409 aaPredicted RBP19.73■□□□□ 0.75
SNX9-201ENST00000392185 TET3O43151 1660 aa19.73■□□□□ 0.75
SNX9-201ENST00000392185 TMEM94Q12767 1356 aa19.73■□□□□ 0.75
SNX9-201ENST00000392185 BLMP54132 1417 aaPredicted RBP19.73■□□□□ 0.75
SNX9-201ENST00000392185 CASTP20810 708 aaKnown RBP19.73■□□□□ 0.75
SNX9-201ENST00000392185 CEBPZQ03701 1054 aaKnown RBP19.73■□□□□ 0.75
SNX9-201ENST00000392185 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
SNX9-201ENST00000392185 KIF1BO60333 1816 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 SDSP20132 328 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 CEP85Q6P2H3 762 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 LINS1Q8NG48 757 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 ZBTB7BO15156 539 aaPredicted RBP19.72■□□□□ 0.75
SNX9-201ENST00000392185 BECN2A8MW95 431 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 CAVIN1Q6NZI2 390 aaKnown RBP19.72■□□□□ 0.75
SNX9-201ENST00000392185 TBC1D2Q9BYX2 928 aa19.72■□□□□ 0.75
SNX9-201ENST00000392185 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 RNF214Q8ND24 703 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 TTC22Q5TAA0 569 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 IL17REQ8NFR9 667 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 PDRG1Q9NUG6 133 aa19.71■□□□□ 0.75
SNX9-201ENST00000392185 KCNQ3O43525 872 aa19.7■□□□□ 0.74
SNX9-201ENST00000392185 PDE1AP54750 535 aa19.7■□□□□ 0.74
SNX9-201ENST00000392185 ARHGAP31Q2M1Z3 1444 aa19.7■□□□□ 0.74
SNX9-201ENST00000392185 ANKRD18BA2A2Z9 1011 aa19.69■□□□□ 0.74
SNX9-201ENST00000392185 SART3Q15020 963 aaKnown RBP19.69■□□□□ 0.74
SNX9-201ENST00000392185 SAFBQ15424 915 aaKnown RBP eCLIP19.69■□□□□ 0.74
SNX9-201ENST00000392185 AKAP2Q9Y2D5 859 aa19.69■□□□□ 0.74
SNX9-201ENST00000392185 GOLIM4O00461 696 aa19.69■□□□□ 0.74
SNX9-201ENST00000392185 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
SNX9-201ENST00000392185 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
SNX9-201ENST00000392185 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
SNX9-201ENST00000392185 ALDH1L1O75891 902 aa19.68■□□□□ 0.74
SNX9-201ENST00000392185 TDO2P48775 406 aa19.68■□□□□ 0.74
SNX9-201ENST00000392185 TPM4P67936 248 aa19.68■□□□□ 0.74
SNX9-201ENST00000392185 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNX9-201ENST00000392185 NACAP1Q9BZK3 213 aa19.68■□□□□ 0.74
SNX9-201ENST00000392185 DCTPP1Q9H773 170 aa19.68■□□□□ 0.74
SNX9-201ENST00000392185 GOLGA6L19H0YKK7 550 aa19.67■□□□□ 0.74
SNX9-201ENST00000392185 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
SNX9-201ENST00000392185 PDCP20941 246 aa19.67■□□□□ 0.74
SNX9-201ENST00000392185 ZNF496Q96IT1 587 aaPredicted RBP19.67■□□□□ 0.74
SNX9-201ENST00000392185 PLEKHF1Q96S99 279 aa19.67■□□□□ 0.74
SNX9-201ENST00000392185 DDX46Q7L014 1031 aaKnown RBP19.67■□□□□ 0.74
SNX9-201ENST00000392185 A2ML1A8K2U0 1454 aa19.67■□□□□ 0.74
SNX9-201ENST00000392185 LARP1BQ659C4 914 aaKnown RBP19.66■□□□□ 0.74
SNX9-201ENST00000392185 AIDAQ96BJ3 306 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 C8orf34Q49A92 452 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 DDX11Q96FC9 970 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 ABCA9Q8IUA7 1624 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 PES1O00541 588 aaKnown RBP19.66■□□□□ 0.74
SNX9-201ENST00000392185 SEC24BO95487 1268 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 A1BGP04217 495 aa19.66■□□□□ 0.74
SNX9-201ENST00000392185 ZSCAN25Q6NSZ9 544 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 CCDC73Q6ZRK6 1079 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 FERMT3Q86UX7 667 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 OTUD7AQ8TE49 926 aaPredicted RBP19.65■□□□□ 0.74
SNX9-201ENST00000392185 TBC1D32Q96NH3 1257 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 USP19O94966 1318 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 NUP133Q8WUM0 1156 aa19.65■□□□□ 0.74
SNX9-201ENST00000392185 RNF123Q5XPI4 1314 aa19.64■□□□□ 0.74
SNX9-201ENST00000392185 RNF17Q9BXT8 1623 aaKnown RBP19.64■□□□□ 0.74
SNX9-201ENST00000392185 CCDC83Q8IWF9 413 aa19.64■□□□□ 0.74
SNX9-201ENST00000392185 SHROOM2Q13796 1616 aa19.64■□□□□ 0.73
SNX9-201ENST00000392185 UNC13BO14795 1591 aa19.63■□□□□ 0.73
SNX9-201ENST00000392185 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
SNX9-201ENST00000392185 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
SNX9-201ENST00000392185 NPHP4O75161 1426 aaPredicted RBP19.63■□□□□ 0.73
SNX9-201ENST00000392185 SDF4Q9BRK5 362 aa19.63■□□□□ 0.73
SNX9-201ENST00000392185 CTNNA3Q9UI47 895 aa19.63■□□□□ 0.73
SNX9-201ENST00000392185 IQSEC3Q9UPP2 1182 aaPredicted RBP19.63■□□□□ 0.73
SNX9-201ENST00000392185 MCM4P33991 863 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 ANKRD1Q15327 319 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 KLHDC4Q8TBB5 520 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 PCDH11XQ9BZA7 1347 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 PCDH11YQ9BZA8 1340 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 EVI5LQ96CN4 794 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 ANKIB1Q9P2G1 1089 aa19.62■□□□□ 0.73
SNX9-201ENST00000392185 USP6P35125 1406 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms