RNA–Protein interactions for RNA: ENST00000390625.3

IGHV3-49-201, Transcript of immunoglobulin heavy variable 3-49, humanhuman

APPRIS P1 BASIC

Gene IGHV3-49, Length 439 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-49-201ENST00000390625 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.6
IGHV3-49-201ENST00000390625 SOS1Q07889 1333 aaPredicted RBP18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 IL13P35225 146 aa18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 C1orf141Q5JVX7 400 aa18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 ANKRD31Q8N7Z5 1873 aa18.82■□□□□ 0.6
IGHV3-49-201ENST00000390625 CYP19A1P11511 503 aaPredicted RBP18.81■□□□□ 0.6
IGHV3-49-201ENST00000390625 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
IGHV3-49-201ENST00000390625 KDM2BQ8NHM5 1336 aa18.8■□□□□ 0.6
IGHV3-49-201ENST00000390625 FSTL1Q12841 308 aa18.8■□□□□ 0.6
IGHV3-49-201ENST00000390625 CCDC24Q8N4L8 307 aa18.8■□□□□ 0.6
IGHV3-49-201ENST00000390625 MORC1Q86VD1 984 aa18.79■□□□□ 0.6
IGHV3-49-201ENST00000390625 POTECB2RU33 542 aa18.78■□□□□ 0.6
IGHV3-49-201ENST00000390625 HMOX1P09601 288 aa18.78■□□□□ 0.6
IGHV3-49-201ENST00000390625 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
IGHV3-49-201ENST00000390625 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.6
IGHV3-49-201ENST00000390625 NFKBIEO00221 500 aa18.77■□□□□ 0.6
IGHV3-49-201ENST00000390625 RNMTO43148 476 aaKnown RBP18.77■□□□□ 0.6
IGHV3-49-201ENST00000390625 COL15A1P39059 1388 aa18.77■□□□□ 0.6
IGHV3-49-201ENST00000390625 CACNA1SQ13698 1873 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 ZPR1O75312 459 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 SERPINB2P05120 415 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 MRC1P22897 1456 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 UBR2Q8IWV8 1755 aa18.76■□□□□ 0.59
IGHV3-49-201ENST00000390625 ZNF219Q9P2Y4 722 aaPredicted RBP18.75■□□□□ 0.59
IGHV3-49-201ENST00000390625 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
IGHV3-49-201ENST00000390625 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
IGHV3-49-201ENST00000390625 C2CD5Q86YS7 1000 aa18.74■□□□□ 0.59
IGHV3-49-201ENST00000390625 SMC1BQ8NDV3 1235 aa18.74■□□□□ 0.59
IGHV3-49-201ENST00000390625 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
IGHV3-49-201ENST00000390625 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
IGHV3-49-201ENST00000390625 MTHFSDQ2M296 383 aaKnown RBP18.73■□□□□ 0.59
IGHV3-49-201ENST00000390625 TNS4Q8IZW8 715 aa18.73■□□□□ 0.59
IGHV3-49-201ENST00000390625 FER1L6Q2WGJ9 1857 aa18.73■□□□□ 0.59
IGHV3-49-201ENST00000390625 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 HSPA1AP0DMV8 641 aaKnown RBP18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 HSPA1BP0DMV9 641 aaKnown RBP18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 LMNB1P20700 586 aa18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
IGHV3-49-201ENST00000390625 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
IGHV3-49-201ENST00000390625 TTLL6Q8N841 843 aa18.71■□□□□ 0.59
IGHV3-49-201ENST00000390625 SLX4Q8IY92 1834 aa18.71■□□□□ 0.59
IGHV3-49-201ENST00000390625 VEGFAP15692 232 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-49-201ENST00000390625 TRIM26Q12899 539 aaPredicted RBP18.7■□□□□ 0.58
IGHV3-49-201ENST00000390625 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.58
IGHV3-49-201ENST00000390625 AMER1Q5JTC6 1135 aaPredicted RBP18.69■□□□□ 0.58
IGHV3-49-201ENST00000390625 PCGF6Q9BYE7 350 aa18.69■□□□□ 0.58
IGHV3-49-201ENST00000390625 C21orf2O43822 256 aa18.68■□□□□ 0.58
IGHV3-49-201ENST00000390625 SCN7AQ01118 1682 aa18.68■□□□□ 0.58
IGHV3-49-201ENST00000390625 EIF5P55010 431 aaKnown RBP18.67■□□□□ 0.58
IGHV3-49-201ENST00000390625 TBC1D2BQ9UPU7 963 aa18.67■□□□□ 0.58
IGHV3-49-201ENST00000390625 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
IGHV3-49-201ENST00000390625 ZNF622Q969S3 477 aaKnown RBP eCLIP18.66■□□□□ 0.58
IGHV3-49-201ENST00000390625 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
IGHV3-49-201ENST00000390625 H0YIN7 160 aa18.65■□□□□ 0.58
IGHV3-49-201ENST00000390625 KCNQ3O43525 872 aa18.65■□□□□ 0.58
IGHV3-49-201ENST00000390625 PIP4K2AP48426 406 aaPredicted RBP18.65■□□□□ 0.58
IGHV3-49-201ENST00000390625 PRR5LQ6MZQ0 368 aa18.65■□□□□ 0.58
IGHV3-49-201ENST00000390625 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
IGHV3-49-201ENST00000390625 DDNO94850 711 aaPredicted RBP18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 IL17REQ8NFR9 667 aa18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 MKRN1Q9UHC7 482 aaKnown RBP18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 TIMELESSQ9UNS1 1208 aa18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 KNSTRNQ9Y448 316 aa18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 ZC3H4Q9UPT8 1303 aaKnown RBP18.64■□□□□ 0.57
IGHV3-49-201ENST00000390625 A1BGP04217 495 aa18.63■□□□□ 0.57
IGHV3-49-201ENST00000390625 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
IGHV3-49-201ENST00000390625 ERFEQ4G0M1 354 aa18.62■□□□□ 0.57
IGHV3-49-201ENST00000390625 COL3A1P02461 1466 aaPredicted RBP18.62■□□□□ 0.57
IGHV3-49-201ENST00000390625 CC2D1BQ5T0F9 858 aaKnown RBP18.61■□□□□ 0.57
IGHV3-49-201ENST00000390625 OLFM4Q6UX06 510 aa18.61■□□□□ 0.57
IGHV3-49-201ENST00000390625 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
IGHV3-49-201ENST00000390625 PRAMEF22A3QJZ6 481 aa18.6■□□□□ 0.57
IGHV3-49-201ENST00000390625 VSIG10Q8N0Z9 540 aa18.6■□□□□ 0.57
IGHV3-49-201ENST00000390625 ARFGEF2Q9Y6D5 1785 aa18.6■□□□□ 0.57
IGHV3-49-201ENST00000390625 HEG1Q9ULI3 1381 aa18.59■□□□□ 0.57
IGHV3-49-201ENST00000390625 CAMTA2O94983 1202 aa18.59■□□□□ 0.57
IGHV3-49-201ENST00000390625 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
IGHV3-49-201ENST00000390625 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.56
IGHV3-49-201ENST00000390625 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.56
IGHV3-49-201ENST00000390625 FOXN1O15353 648 aa18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 STARD3NLO95772 234 aa18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 CHADLQ6NUI6 762 aa18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 PRPF40BQ6NWY9 871 aaKnown RBP18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 ZNF790Q6PG37 636 aa18.57■□□□□ 0.56
IGHV3-49-201ENST00000390625 SLC51AQ86UW1 340 aa18.56■□□□□ 0.56
IGHV3-49-201ENST00000390625 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
IGHV3-49-201ENST00000390625 SRGNP10124 158 aa18.55■□□□□ 0.56
IGHV3-49-201ENST00000390625 PDE6BP35913 854 aa18.55■□□□□ 0.56
IGHV3-49-201ENST00000390625 DPY19L2Q6NUT2 758 aa18.55■□□□□ 0.56
IGHV3-49-201ENST00000390625 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
IGHV3-49-201ENST00000390625 USP16Q9Y5T5 823 aa18.55■□□□□ 0.56
IGHV3-49-201ENST00000390625 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
IGHV3-49-201ENST00000390625 C7orf43Q8WVR3 580 aa18.54■□□□□ 0.56
IGHV3-49-201ENST00000390625 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
IGHV3-49-201ENST00000390625 A0A087WZG4 1122 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms