RNA–Protein interactions for RNA: ENST00000390448.3

TRAV20-201, Transcript of T cell receptor alpha variable 20, humanhuman

APPRIS P1 BASIC

Gene TRAV20, Length 406 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20-201ENST00000390448 COL5A3P25940 1745 aaPredicted RBP12.13□□□□□ -0.47
TRAV20-201ENST00000390448 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
TRAV20-201ENST00000390448 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
TRAV20-201ENST00000390448 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
TRAV20-201ENST00000390448 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
TRAV20-201ENST00000390448 KIF13BQ9NQT8 1826 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 A0A087WZG4 1122 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 NPHP1O15259 732 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 SERPINB2P05120 415 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 NFIXQ14938 502 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 BICDL1Q6ZP65 573 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
TRAV20-201ENST00000390448 COL15A1P39059 1388 aa12.1□□□□□ -0.47
TRAV20-201ENST00000390448 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
TRAV20-201ENST00000390448 H0YIN7 160 aa12.1□□□□□ -0.47
TRAV20-201ENST00000390448 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
TRAV20-201ENST00000390448 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
TRAV20-201ENST00000390448 C2CD5Q86YS7 1000 aa12.09□□□□□ -0.47
TRAV20-201ENST00000390448 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
TRAV20-201ENST00000390448 RBM46Q8TBY0 533 aaKnown RBP12.09□□□□□ -0.47
TRAV20-201ENST00000390448 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
TRAV20-201ENST00000390448 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
TRAV20-201ENST00000390448 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
TRAV20-201ENST00000390448 SCN11AQ9UI33 1791 aa12.08□□□□□ -0.48
TRAV20-201ENST00000390448 LMNB1P20700 586 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 TJP1Q07157 1748 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 FSTL1Q12841 308 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 ZNF790Q6PG37 636 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 ZNF622Q969S3 477 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRAV20-201ENST00000390448 ZNF496Q96IT1 587 aaPredicted RBP12.07□□□□□ -0.48
TRAV20-201ENST00000390448 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 NUDCQ9Y266 331 aa12.07□□□□□ -0.48
TRAV20-201ENST00000390448 RASSF7Q02833 373 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 IL17REQ8NFR9 667 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 BCL2L12Q9HB09 334 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 KCPQ6ZWJ8 1503 aa12.06□□□□□ -0.48
TRAV20-201ENST00000390448 BTBD11A6QL63 1104 aa12.05□□□□□ -0.48
TRAV20-201ENST00000390448 PDE6BP35913 854 aa12.05□□□□□ -0.48
TRAV20-201ENST00000390448 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
TRAV20-201ENST00000390448 RTF1Q92541 710 aaKnown RBP12.05□□□□□ -0.48
TRAV20-201ENST00000390448 SETDB2Q96T68 719 aa12.05□□□□□ -0.48
TRAV20-201ENST00000390448 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
TRAV20-201ENST00000390448 MRC1P22897 1456 aa12.05□□□□□ -0.48
TRAV20-201ENST00000390448 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
TRAV20-201ENST00000390448 VEGFAP15692 232 aaPredicted RBP12.04□□□□□ -0.48
TRAV20-201ENST00000390448 PRKAR2BP31323 418 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
TRAV20-201ENST00000390448 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 BRIP1Q9BX63 1249 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
TRAV20-201ENST00000390448 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
TRAV20-201ENST00000390448 A1BGP04217 495 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 U2AF1L5P0DN76 240 aaPredicted RBP12.03□□□□□ -0.48
TRAV20-201ENST00000390448 ST5P78524 1137 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 HTRA3P83110 453 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 U2AF1Q01081 240 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAV20-201ENST00000390448 CCDC24Q8N4L8 307 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 CNBD1Q8NA66 436 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 BRCA1P38398 1863 aaKnown RBP12.03□□□□□ -0.48
TRAV20-201ENST00000390448 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
TRAV20-201ENST00000390448 GLTPD2A6NH11 291 aa12.02□□□□□ -0.49
TRAV20-201ENST00000390448 C21orf2O43822 256 aa12.02□□□□□ -0.49
TRAV20-201ENST00000390448 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
TRAV20-201ENST00000390448 NEFMP07197 916 aa12.01□□□□□ -0.49
TRAV20-201ENST00000390448 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
TRAV20-201ENST00000390448 DZIP3Q86Y13 1208 aaKnown RBP12.01□□□□□ -0.49
TRAV20-201ENST00000390448 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
TRAV20-201ENST00000390448 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
TRAV20-201ENST00000390448 ERFEQ4G0M1 354 aa12□□□□□ -0.49
TRAV20-201ENST00000390448 CNKSR1Q969H4 720 aa12□□□□□ -0.49
TRAV20-201ENST00000390448 ZNF652Q9Y2D9 606 aa12□□□□□ -0.49
TRAV20-201ENST00000390448 ADAMTS7Q9UKP4 1686 aa12□□□□□ -0.49
TRAV20-201ENST00000390448 NFKBIEO00221 500 aa11.99□□□□□ -0.49
TRAV20-201ENST00000390448 KCNQ3O43525 872 aa11.99□□□□□ -0.49
TRAV20-201ENST00000390448 SNRPA1P09661 255 aaKnown RBP11.99□□□□□ -0.49
TRAV20-201ENST00000390448 PIP4K2AP48426 406 aaPredicted RBP11.99□□□□□ -0.49
TRAV20-201ENST00000390448 MCM10Q7L590 875 aa11.99□□□□□ -0.49
TRAV20-201ENST00000390448 NBPF5PQ86XG9 351 aaPredicted RBP11.99□□□□□ -0.49
TRAV20-201ENST00000390448 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
TRAV20-201ENST00000390448 AFDNP55196 1824 aaKnown RBP11.98□□□□□ -0.49
TRAV20-201ENST00000390448 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
TRAV20-201ENST00000390448 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
TRAV20-201ENST00000390448 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
TRAV20-201ENST00000390448 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
TRAV20-201ENST00000390448 USP16Q9Y5T5 823 aa11.98□□□□□ -0.49
TRAV20-201ENST00000390448 PCNTO95613 3336 aa11.98□□□□□ -0.49
TRAV20-201ENST00000390448 COL3A1P02461 1466 aaPredicted RBP11.97□□□□□ -0.49
TRAV20-201ENST00000390448 CEMIPQ8WUJ3 1361 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 FAM177BA6PVY3 158 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 PRELPP51888 382 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 STYK1Q6J9G0 422 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 TPTE2Q6XPS3 522 aa11.97□□□□□ -0.49
TRAV20-201ENST00000390448 MASTLQ96GX5 879 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms