RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 PLSCR1O15162 318 aa11.71□□□□□ -0.53
TRAV17-201ENST00000390445 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
TRAV17-201ENST00000390445 ZNF454Q8N9F8 522 aa11.71□□□□□ -0.53
TRAV17-201ENST00000390445 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 QSER1Q2KHR3 1735 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 IL2RBP14784 551 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 IP6K1Q92551 441 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 COG3Q96JB2 828 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
TRAV17-201ENST00000390445 PDGFDQ9GZP0 370 aaPredicted RBP11.7□□□□□ -0.54
TRAV17-201ENST00000390445 TMF1P82094 1093 aa11.69□□□□□ -0.54
TRAV17-201ENST00000390445 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
TRAV17-201ENST00000390445 MARVELD3Q96A59 401 aa11.69□□□□□ -0.54
TRAV17-201ENST00000390445 EPAS1Q99814 870 aa11.69□□□□□ -0.54
TRAV17-201ENST00000390445 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
TRAV17-201ENST00000390445 TAF1LQ8IZX4 1826 aa11.69□□□□□ -0.54
TRAV17-201ENST00000390445 HOXC9P31274 260 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 MEGF6O75095 1541 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 TOGARAM1Q9Y4F4 1720 aa11.68□□□□□ -0.54
TRAV17-201ENST00000390445 FYB1O15117 783 aa11.67□□□□□ -0.54
TRAV17-201ENST00000390445 AMPHP49418 695 aa11.67□□□□□ -0.54
TRAV17-201ENST00000390445 PKD1L3Q7Z443 1732 aa11.66□□□□□ -0.54
TRAV17-201ENST00000390445 GPIHBP1Q8IV16 184 aa11.66□□□□□ -0.54
TRAV17-201ENST00000390445 ZC3H15Q8WU90 426 aaKnown RBP11.66□□□□□ -0.54
TRAV17-201ENST00000390445 ADAM33Q9BZ11 813 aa11.66□□□□□ -0.54
TRAV17-201ENST00000390445 CHD4Q14839 1912 aa11.66□□□□□ -0.54
TRAV17-201ENST00000390445 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
TRAV17-201ENST00000390445 GPR37O15354 613 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 USHBP1Q8N6Y0 703 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 DDX54Q8TDD1 881 aaKnown RBP11.65□□□□□ -0.54
TRAV17-201ENST00000390445 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 CDHR5Q9HBB8 845 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
TRAV17-201ENST00000390445 C5P01031 1676 aa11.65□□□□□ -0.55
TRAV17-201ENST00000390445 MAP3K7O43318 606 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 EMP3P54852 163 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
TRAV17-201ENST00000390445 FBXW7Q969H0 707 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 CARD14Q9BXL6 1004 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 SPON1Q9HCB6 807 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 RTL1A6NKG5 1358 aa11.64□□□□□ -0.55
TRAV17-201ENST00000390445 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
TRAV17-201ENST00000390445 NBPF6Q5VWK0 638 aa11.63□□□□□ -0.55
TRAV17-201ENST00000390445 NBPF4Q96M43 638 aa11.63□□□□□ -0.55
TRAV17-201ENST00000390445 SLC15A2Q16348 729 aa11.62□□□□□ -0.55
TRAV17-201ENST00000390445 HSP90AB2PQ58FF8 381 aa11.62□□□□□ -0.55
TRAV17-201ENST00000390445 PPP4R3BQ5MIZ7 849 aa11.62□□□□□ -0.55
TRAV17-201ENST00000390445 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
TRAV17-201ENST00000390445 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
TRAV17-201ENST00000390445 UTRNP46939 3433 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 VARS2Q5ST30 1063 aaKnown RBP11.61□□□□□ -0.55
TRAV17-201ENST00000390445 POLR3GLQ9BT43 218 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 LRRC4BQ9NT99 713 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 EMILIN1Q9Y6C2 1016 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 NSD2O96028 1365 aa11.61□□□□□ -0.55
TRAV17-201ENST00000390445 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
TRAV17-201ENST00000390445 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
TRAV17-201ENST00000390445 FLT4P35916 1363 aa11.6□□□□□ -0.55
TRAV17-201ENST00000390445 KCNQ4P56696 695 aa11.6□□□□□ -0.55
TRAV17-201ENST00000390445 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
TRAV17-201ENST00000390445 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
TRAV17-201ENST00000390445 SYTL4Q96C24 671 aaPredicted RBP11.6□□□□□ -0.55
TRAV17-201ENST00000390445 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
TRAV17-201ENST00000390445 INSRP06213 1382 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 POTEB3A0JP26 581 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 C6orf132Q5T0Z8 1188 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 NPDC1Q9NQX5 325 aaPredicted RBP11.59□□□□□ -0.55
TRAV17-201ENST00000390445 UBR3Q6ZT12 1888 aa11.59□□□□□ -0.55
TRAV17-201ENST00000390445 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
TRAV17-201ENST00000390445 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
TRAV17-201ENST00000390445 ZMYND10O75800 440 aa11.57□□□□□ -0.56
TRAV17-201ENST00000390445 PTGDRQ13258 359 aa11.57□□□□□ -0.56
TRAV17-201ENST00000390445 KIF24Q5T7B8 1368 aa11.56□□□□□ -0.56
TRAV17-201ENST00000390445 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
TRAV17-201ENST00000390445 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
TRAV17-201ENST00000390445 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
TRAV17-201ENST00000390445 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
TRAV17-201ENST00000390445 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
TRAV17-201ENST00000390445 NCAPD2Q15021 1401 aa11.55□□□□□ -0.56
TRAV17-201ENST00000390445 POTEEQ6S8J3 1075 aa11.55□□□□□ -0.56
TRAV17-201ENST00000390445 MTFR1LQ9H019 292 aa11.55□□□□□ -0.56
TRAV17-201ENST00000390445 FCHSD2O94868 740 aa11.54□□□□□ -0.56
TRAV17-201ENST00000390445 COL9A1P20849 921 aa11.54□□□□□ -0.56
TRAV17-201ENST00000390445 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
TRAV17-201ENST00000390445 EIF4G2P78344 907 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAV17-201ENST00000390445 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
TRAV17-201ENST00000390445 CGNL1Q0VF96 1302 aa11.54□□□□□ -0.56
TRAV17-201ENST00000390445 PNPLA7Q6ZV29 1317 aa11.54□□□□□ -0.56
TRAV17-201ENST00000390445 CYP27B1O15528 508 aa11.53□□□□□ -0.56
TRAV17-201ENST00000390445 FECHP22830 423 aa11.53□□□□□ -0.56
TRAV17-201ENST00000390445 SLC27A3Q5K4L6 730 aa11.53□□□□□ -0.56
TRAV17-201ENST00000390445 FHDC1Q9C0D6 1143 aaPredicted RBP11.53□□□□□ -0.56
TRAV17-201ENST00000390445 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms