RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 C10orf71Q711Q0 1435 aa18.12■□□□□ 0.49
TRBV4-2-201ENST00000390392 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
TRBV4-2-201ENST00000390392 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
TRBV4-2-201ENST00000390392 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
TRBV4-2-201ENST00000390392 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
TRBV4-2-201ENST00000390392 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
TRBV4-2-201ENST00000390392 PXDNLA1KZ92 1463 aa18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 EIF5P55010 431 aaKnown RBP18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 C1QTNF8P60827 252 aa18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 PIM2Q9P1W9 311 aa18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
TRBV4-2-201ENST00000390392 COL15A1P39059 1388 aa18.09■□□□□ 0.49
TRBV4-2-201ENST00000390392 POLRMTO00411 1230 aaKnown RBP18.09■□□□□ 0.49
TRBV4-2-201ENST00000390392 BCS1LQ9Y276 419 aa18.09■□□□□ 0.49
TRBV4-2-201ENST00000390392 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
TRBV4-2-201ENST00000390392 DPEP1P16444 411 aa18.08■□□□□ 0.48
TRBV4-2-201ENST00000390392 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
TRBV4-2-201ENST00000390392 IL6STP40189 918 aaPredicted RBP18.08■□□□□ 0.48
TRBV4-2-201ENST00000390392 GOLGB1Q14789 3259 aaKnown RBP18.08■□□□□ 0.48
TRBV4-2-201ENST00000390392 KCNA3P22001 575 aa18.07■□□□□ 0.48
TRBV4-2-201ENST00000390392 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
TRBV4-2-201ENST00000390392 DDR1Q08345 913 aa18.06■□□□□ 0.48
TRBV4-2-201ENST00000390392 RALBP1Q15311 655 aa18.06■□□□□ 0.48
TRBV4-2-201ENST00000390392 GPBP1L1Q9HC44 474 aaPredicted RBP18.06■□□□□ 0.48
TRBV4-2-201ENST00000390392 PDZRN3Q9UPQ7 1066 aa18.06■□□□□ 0.48
TRBV4-2-201ENST00000390392 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
TRBV4-2-201ENST00000390392 NFIXQ14938 502 aa18.05■□□□□ 0.48
TRBV4-2-201ENST00000390392 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
TRBV4-2-201ENST00000390392 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
TRBV4-2-201ENST00000390392 SERPINB2P05120 415 aa18.04■□□□□ 0.48
TRBV4-2-201ENST00000390392 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
TRBV4-2-201ENST00000390392 ARHGAP27Q6ZUM4 889 aa18.04■□□□□ 0.48
TRBV4-2-201ENST00000390392 PNISRQ8TF01 805 aaKnown RBP18.04■□□□□ 0.48
TRBV4-2-201ENST00000390392 ARFGEF1Q9Y6D6 1849 aa18.03■□□□□ 0.48
TRBV4-2-201ENST00000390392 BCL2L12Q9HB09 334 aa18.03■□□□□ 0.48
TRBV4-2-201ENST00000390392 WWC3Q9ULE0 1092 aa18.03■□□□□ 0.48
TRBV4-2-201ENST00000390392 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
TRBV4-2-201ENST00000390392 ADCY9O60503 1353 aa18.03■□□□□ 0.48
TRBV4-2-201ENST00000390392 MCM10Q7L590 875 aa18.02■□□□□ 0.48
TRBV4-2-201ENST00000390392 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 AFDNP55196 1824 aaKnown RBP18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 RGL2O15211 777 aa18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 A1BGP04217 495 aa18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 PLEKHF1Q96S99 279 aa18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 USP16Q9Y5T5 823 aa18.01■□□□□ 0.47
TRBV4-2-201ENST00000390392 KCNQ3O43525 872 aa18■□□□□ 0.47
TRBV4-2-201ENST00000390392 CLEC4GQ6UXB4 293 aa18■□□□□ 0.47
TRBV4-2-201ENST00000390392 H0YIN7 160 aa17.99■□□□□ 0.47
TRBV4-2-201ENST00000390392 SETDB2Q96T68 719 aa17.99■□□□□ 0.47
TRBV4-2-201ENST00000390392 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
TRBV4-2-201ENST00000390392 MAPK8IP3Q9UPT6 1336 aa17.98■□□□□ 0.47
TRBV4-2-201ENST00000390392 CHRNA5P30532 468 aa17.98■□□□□ 0.47
TRBV4-2-201ENST00000390392 PDE6BP35913 854 aa17.98■□□□□ 0.47
TRBV4-2-201ENST00000390392 NFE2L2Q16236 605 aa17.98■□□□□ 0.47
TRBV4-2-201ENST00000390392 BRIP1Q9BX63 1249 aa17.98■□□□□ 0.47
TRBV4-2-201ENST00000390392 DCTN1Q14203 1278 aa17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 TTLL6Q8N841 843 aa17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 ZNF652Q9Y2D9 606 aa17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 ZNF330Q9Y3S2 320 aaPredicted RBP17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
TRBV4-2-201ENST00000390392 CARMIL3Q8ND23 1372 aa17.96■□□□□ 0.47
TRBV4-2-201ENST00000390392 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
TRBV4-2-201ENST00000390392 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
TRBV4-2-201ENST00000390392 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
TRBV4-2-201ENST00000390392 DDX10Q13206 875 aaKnown RBP17.95■□□□□ 0.46
TRBV4-2-201ENST00000390392 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
TRBV4-2-201ENST00000390392 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
TRBV4-2-201ENST00000390392 NPHP1O15259 732 aa17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 ST5P78524 1137 aa17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 C9orf131Q5VYM1 1079 aa17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 DLEC1Q9Y238 1755 aa17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 MYBBP1AQ9BQG0 1328 aaKnown RBP17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 SCN7AQ01118 1682 aa17.93■□□□□ 0.46
TRBV4-2-201ENST00000390392 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
TRBV4-2-201ENST00000390392 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
TRBV4-2-201ENST00000390392 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
TRBV4-2-201ENST00000390392 SBF1O95248 1867 aa17.91■□□□□ 0.46
TRBV4-2-201ENST00000390392 PRAMEF22A3QJZ6 481 aa17.91■□□□□ 0.46
TRBV4-2-201ENST00000390392 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
TRBV4-2-201ENST00000390392 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
TRBV4-2-201ENST00000390392 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
TRBV4-2-201ENST00000390392 KIF3CO14782 793 aa17.9■□□□□ 0.46
TRBV4-2-201ENST00000390392 RIPK4P57078 832 aa17.9■□□□□ 0.46
TRBV4-2-201ENST00000390392 EIF4A1P60842 406 aaKnown RBP17.9■□□□□ 0.46
TRBV4-2-201ENST00000390392 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
TRBV4-2-201ENST00000390392 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
TRBV4-2-201ENST00000390392 BCORQ6W2J9 1755 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 ERVV-1B6SEH8 477 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 TOMM70O94826 608 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 ZNF622Q969S3 477 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
TRBV4-2-201ENST00000390392 KDM3BQ7LBC6 1761 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms