RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
SOD1-202ENST00000389995 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
SOD1-202ENST00000389995 TM4SF1P30408 202 aa16.31■□□□□ 0.2
SOD1-202ENST00000389995 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
SOD1-202ENST00000389995 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
SOD1-202ENST00000389995 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
SOD1-202ENST00000389995 ZPR1O75312 459 aa16.28■□□□□ 0.2
SOD1-202ENST00000389995 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
SOD1-202ENST00000389995 C1orf141Q5JVX7 400 aa16.28■□□□□ 0.2
SOD1-202ENST00000389995 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.2
SOD1-202ENST00000389995 LMNB1P20700 586 aa16.27■□□□□ 0.2
SOD1-202ENST00000389995 NFIXQ14938 502 aa16.27■□□□□ 0.2
SOD1-202ENST00000389995 CARMIL3Q8ND23 1372 aa16.26■□□□□ 0.19
SOD1-202ENST00000389995 POTECB2RU33 542 aa16.26■□□□□ 0.19
SOD1-202ENST00000389995 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
SOD1-202ENST00000389995 COL11A2P13942 1736 aaPredicted RBP16.25■□□□□ 0.19
SOD1-202ENST00000389995 SOS1Q07889 1333 aaPredicted RBP16.25■□□□□ 0.19
SOD1-202ENST00000389995 NFKBIEO00221 500 aa16.25■□□□□ 0.19
SOD1-202ENST00000389995 ZNF219Q9P2Y4 722 aaPredicted RBP16.25■□□□□ 0.19
SOD1-202ENST00000389995 ZC3H4Q9UPT8 1303 aaKnown RBP16.24■□□□□ 0.19
SOD1-202ENST00000389995 SLC39A6Q13433 755 aa16.24■□□□□ 0.19
SOD1-202ENST00000389995 SULT6B1Q6IMI4 303 aa16.24■□□□□ 0.19
SOD1-202ENST00000389995 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
SOD1-202ENST00000389995 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
SOD1-202ENST00000389995 BCL2L12Q9HB09 334 aa16.24■□□□□ 0.19
SOD1-202ENST00000389995 SERPINB2P05120 415 aa16.23■□□□□ 0.19
SOD1-202ENST00000389995 CYP19A1P11511 503 aaPredicted RBP16.23■□□□□ 0.19
SOD1-202ENST00000389995 TTLL6Q8N841 843 aa16.23■□□□□ 0.19
SOD1-202ENST00000389995 LGR6Q9HBX8 967 aa16.23■□□□□ 0.19
SOD1-202ENST00000389995 MKRN1Q9UHC7 482 aaKnown RBP16.23■□□□□ 0.19
SOD1-202ENST00000389995 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 BICDL1Q6ZP65 573 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 CCDC24Q8N4L8 307 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 NARFQ9UHQ1 456 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 COL15A1P39059 1388 aa16.22■□□□□ 0.19
SOD1-202ENST00000389995 POTEIP0CG38 1075 aa16.21■□□□□ 0.19
SOD1-202ENST00000389995 POTEJP0CG39 1038 aa16.21■□□□□ 0.19
SOD1-202ENST00000389995 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.18
SOD1-202ENST00000389995 H0YIN7 160 aa16.19■□□□□ 0.18
SOD1-202ENST00000389995 C21orf2O43822 256 aa16.19■□□□□ 0.18
SOD1-202ENST00000389995 CANXP27824 592 aaKnown RBP16.19■□□□□ 0.18
SOD1-202ENST00000389995 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.183e-13■□□□□ 10.8
SOD1-202ENST00000389995 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
SOD1-202ENST00000389995 PANK3Q9H999 370 aa16.18■□□□□ 0.18
SOD1-202ENST00000389995 FOXN1O15353 648 aa16.17■□□□□ 0.18
SOD1-202ENST00000389995 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
SOD1-202ENST00000389995 AKAP4Q5JQC9 854 aa16.17■□□□□ 0.18
SOD1-202ENST00000389995 DPY19L2Q6NUT2 758 aa16.17■□□□□ 0.18
SOD1-202ENST00000389995 MRC1P22897 1456 aa16.16■□□□□ 0.18
SOD1-202ENST00000389995 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
SOD1-202ENST00000389995 DDNO94850 711 aaPredicted RBP16.16■□□□□ 0.18
SOD1-202ENST00000389995 IL13P35225 146 aa16.16■□□□□ 0.18
SOD1-202ENST00000389995 CHADLQ6NUI6 762 aa16.16■□□□□ 0.18
SOD1-202ENST00000389995 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
SOD1-202ENST00000389995 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
SOD1-202ENST00000389995 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
SOD1-202ENST00000389995 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
SOD1-202ENST00000389995 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
SOD1-202ENST00000389995 SCN4AP35499 1836 aa16.15■□□□□ 0.18
SOD1-202ENST00000389995 HMOX1P09601 288 aa16.14■□□□□ 0.17
SOD1-202ENST00000389995 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
SOD1-202ENST00000389995 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
SOD1-202ENST00000389995 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
SOD1-202ENST00000389995 SIPA1L3O60292 1781 aaPredicted RBP16.11■□□□□ 0.17
SOD1-202ENST00000389995 EIF5P55010 431 aaKnown RBP16.11■□□□□ 0.17
SOD1-202ENST00000389995 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
SOD1-202ENST00000389995 TAOK3Q9H2K8 898 aa16.11■□□□□ 0.17
SOD1-202ENST00000389995 CNTNAP1P78357 1384 aa16.11■□□□□ 0.17
SOD1-202ENST00000389995 VEGFBP49765 207 aa16.1■□□□□ 0.17
SOD1-202ENST00000389995 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
SOD1-202ENST00000389995 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
SOD1-202ENST00000389995 PDE6BP35913 854 aa16.09■□□□□ 0.17
SOD1-202ENST00000389995 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
SOD1-202ENST00000389995 PRPF40BQ6NWY9 871 aaKnown RBP16.08■□□□□ 0.16
SOD1-202ENST00000389995 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
SOD1-202ENST00000389995 STARD3NLO95772 234 aa16.07■□□□□ 0.16
SOD1-202ENST00000389995 HSPA5P11021 654 aaKnown RBP16.07■□□□□ 0.16
SOD1-202ENST00000389995 LBX1P52954 281 aa16.07■□□□□ 0.16
SOD1-202ENST00000389995 ZNF496Q96IT1 587 aaPredicted RBP16.07■□□□□ 0.16
SOD1-202ENST00000389995 PRDM10Q9NQV6 1147 aa16.07■□□□□ 0.16
SOD1-202ENST00000389995 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
SOD1-202ENST00000389995 ADAMTSL1Q8N6G6 1762 aa16.06■□□□□ 0.16
SOD1-202ENST00000389995 A0A087WZG4 1122 aa16.06■□□□□ 0.16
SOD1-202ENST00000389995 CTCFP49711 727 aaPredicted RBP16.06■□□□□ 0.16
SOD1-202ENST00000389995 EAPPQ56P03 285 aaPredicted RBP16.06■□□□□ 0.16
SOD1-202ENST00000389995 TTC5Q8N0Z6 440 aa16.06■□□□□ 0.16
SOD1-202ENST00000389995 AIDAQ96BJ3 306 aa16.06■□□□□ 0.16
SOD1-202ENST00000389995 TAF1DQ9H5J8 278 aaPredicted RBP16.06■□□□□ 0.16
SOD1-202ENST00000389995 ZNF541Q9H0D2 1346 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 NPHP1O15259 732 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
SOD1-202ENST00000389995 A1BGP04217 495 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 SRGNP10124 158 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 PIP4K2AP48426 406 aaPredicted RBP16.05■□□□□ 0.16
SOD1-202ENST00000389995 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 LDHDQ86WU2 507 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 CNBD1Q8NA66 436 aa16.05■□□□□ 0.16
SOD1-202ENST00000389995 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
SOD1-202ENST00000389995 STYK1Q6J9G0 422 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms