RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 OLFM4Q6UX06 510 aa16.8■□□□□ 0.28
RTF1-201ENST00000389629 KRT222Q8N1A0 295 aa16.8■□□□□ 0.28
RTF1-201ENST00000389629 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
RTF1-201ENST00000389629 ZNF500O60304 480 aaPredicted RBP16.8■□□□□ 0.28
RTF1-201ENST00000389629 DTNBO60941 627 aa16.8■□□□□ 0.28
RTF1-201ENST00000389629 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
RTF1-201ENST00000389629 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
RTF1-201ENST00000389629 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 URI1O94763 535 aaPredicted RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
RTF1-201ENST00000389629 ANAPC15P60006 121 aa16.79■□□□□ 0.28
RTF1-201ENST00000389629 CPLX2Q6PUV4 134 aaKnown RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 DNM1Q05193 864 aaKnown RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 NOL10Q9BSC4 688 aaKnown RBP16.79■□□□□ 0.28
RTF1-201ENST00000389629 POLR1AO95602 1720 aaPredicted RBP16.78■□□□□ 0.28
RTF1-201ENST00000389629 TRIM29Q14134 588 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 SH2B1Q9NRF2 756 aaPredicted RBP16.78■□□□□ 0.28
RTF1-201ENST00000389629 SFPQP23246 707 aaKnown RBP eCLIP16.78■□□□□ 0.28
RTF1-201ENST00000389629 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
RTF1-201ENST00000389629 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
RTF1-201ENST00000389629 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 PIBF1Q8WXW3 757 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
RTF1-201ENST00000389629 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
RTF1-201ENST00000389629 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 STK11IPQ8N1F8 1099 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 ACBD3Q9H3P7 528 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 CCP110O43303 1012 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 APPP05067 770 aa16.77■□□□□ 0.28
RTF1-201ENST00000389629 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.28
RTF1-201ENST00000389629 MSH6P52701 1360 aa16.77■□□□□ 0.27
RTF1-201ENST00000389629 GADD45BO75293 160 aaPredicted RBP16.77■□□□□ 0.27
RTF1-201ENST00000389629 ANO6Q4KMQ2 910 aa16.77■□□□□ 0.27
RTF1-201ENST00000389629 SAMD9LQ8IVG5 1584 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 FAM69CQ0P6D2 419 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 TTC5Q8N0Z6 440 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 TMX1Q9H3N1 280 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 PAXBP1Q9Y5B6 917 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 CHMLP26374 656 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 BRPF1P55201 1214 aaPredicted RBP16.76■□□□□ 0.27
RTF1-201ENST00000389629 GPT2Q8TD30 523 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 VGLL3A8MV65 326 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 FAM200AQ8TCP9 573 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 BOLA2Q9H3K6 86 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 ATP10AO60312 1499 aa16.76■□□□□ 0.27
RTF1-201ENST00000389629 PPIP5K1Q6PFW1 1433 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 PSME1Q06323 249 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 INTS4Q96HW7 963 aaKnown RBP16.75■□□□□ 0.27
RTF1-201ENST00000389629 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 KIF20AO95235 890 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 F13A1P00488 732 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 WASHC4Q2M389 1173 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 BCL2L12Q9HB09 334 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 ZBTB9Q96C00 473 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 TCEANC2Q96MN5 208 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 SLC26A8Q96RN1 970 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 CCDC70Q6NSX1 233 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 RHPN1Q8TCX5 695 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
RTF1-201ENST00000389629 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
RTF1-201ENST00000389629 DACT1Q9NYF0 836 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 H0YHG0 523 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 LUZP1Q86V48 1076 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 HOOK1Q9UJC3 728 aaKnown RBP16.74■□□□□ 0.27
RTF1-201ENST00000389629 IPO7O95373 1038 aaKnown RBP16.74■□□□□ 0.27
RTF1-201ENST00000389629 SKILP12757 684 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 AK2P54819 239 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 ATP8B2P98198 1209 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 ZNF530Q6P9A1 599 aaPredicted RBP16.74■□□□□ 0.27
RTF1-201ENST00000389629 G2E3Q7L622 706 aa16.74■□□□□ 0.27
RTF1-201ENST00000389629 GUCY1B3Q02153 619 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 EIF4A2Q14240 407 aaKnown RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 CFAP100Q494V2 611 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 KIF2AO00139 706 aaPredicted RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 PCMTD1Q96MG8 357 aaPredicted RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 DNAJC25Q9H1X3 360 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 OGFRQ9NZT2 677 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 TRDNQ13061 729 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 USHBP1Q8N6Y0 703 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 CCDC102AQ96A19 550 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 DDX19AQ9NUU7 478 aaKnown RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 CPA1P15085 419 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 BMS1Q14692 1282 aaKnown RBP16.73■□□□□ 0.27
RTF1-201ENST00000389629 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
RTF1-201ENST00000389629 SNW1Q13573 536 aaKnown RBP16.72■□□□□ 0.27
RTF1-201ENST00000389629 AXDND1Q5T1B0 1012 aaPredicted RBP16.72■□□□□ 0.27
RTF1-201ENST00000389629 FOXO3O43524 673 aa16.72■□□□□ 0.27
RTF1-201ENST00000389629 SYT1P21579 422 aa16.72■□□□□ 0.27
RTF1-201ENST00000389629 LRRFIP1Q32MZ4 808 aaKnown RBP16.72■□□□□ 0.27
RTF1-201ENST00000389629 ABCC4O15439 1325 aa16.72■□□□□ 0.27
RTF1-201ENST00000389629 BIN1O00499 593 aa16.71■□□□□ 0.27
RTF1-201ENST00000389629 DNAAF4Q8WXU2 420 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms