RNA–Protein interactions for RNA: ENST00000389609.8

CCDC149-202, Transcript of coiled-coil domain containing 149, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC149, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-202ENST00000389609 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
CCDC149-202ENST00000389609 DMTNQ08495 405 aa13.79□□□□□ -0.2
CCDC149-202ENST00000389609 HSP90AB4PQ58FF6 505 aa13.79□□□□□ -0.2
CCDC149-202ENST00000389609 G2E3Q7L622 706 aa13.79□□□□□ -0.2
CCDC149-202ENST00000389609 CCDC39Q9UFE4 941 aa13.79□□□□□ -0.2
CCDC149-202ENST00000389609 USP42Q9H9J4 1324 aaKnown RBP13.79□□□□□ -0.2
CCDC149-202ENST00000389609 F6X3S4 739 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
CCDC149-202ENST00000389609 UVSSAQ2YD98 709 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 EYA1Q99502 592 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 RBSNQ9H1K0 784 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
CCDC149-202ENST00000389609 NCLP19338 710 aaKnown RBP13.78□□□□□ -0.2
CCDC149-202ENST00000389609 HSPA4P34932 840 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 POLA2Q14181 598 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
CCDC149-202ENST00000389609 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 LMTK3Q96Q04 1460 aa13.78□□□□□ -0.2
CCDC149-202ENST00000389609 PRIM1P49642 420 aaKnown RBP13.77□□□□□ -0.21
CCDC149-202ENST00000389609 FKBP5Q13451 457 aaPredicted RBP13.77□□□□□ -0.21
CCDC149-202ENST00000389609 TAF7Q15545 349 aaPredicted RBP13.77□□□□□ -0.21
CCDC149-202ENST00000389609 ZHX1Q9UKY1 873 aaPredicted RBP13.77□□□□□ -0.21
CCDC149-202ENST00000389609 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
CCDC149-202ENST00000389609 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.21
CCDC149-202ENST00000389609 OVOS2A0A0G2JMS6 1433 aa13.76□□□□□ -0.21
CCDC149-202ENST00000389609 CEMIPQ8WUJ3 1361 aa13.76□□□□□ -0.21
CCDC149-202ENST00000389609 AMPHP49418 695 aa13.76□□□□□ -0.21
CCDC149-202ENST00000389609 TMEM63CQ9P1W3 806 aa13.76□□□□□ -0.21
CCDC149-202ENST00000389609 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
CCDC149-202ENST00000389609 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
CCDC149-202ENST00000389609 RAD50Q92878 1312 aa13.76□□□□□ -0.21
CCDC149-202ENST00000389609 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
CCDC149-202ENST00000389609 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
CCDC149-202ENST00000389609 TTC41PQ6P2S7 1318 aa13.75□□□□□ -0.21
CCDC149-202ENST00000389609 KIF1BPQ96EK5 621 aa13.75□□□□□ -0.21
CCDC149-202ENST00000389609 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
CCDC149-202ENST00000389609 ATP6V1DQ9Y5K8 247 aa13.75□□□□□ -0.21
CCDC149-202ENST00000389609 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
CCDC149-202ENST00000389609 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
CCDC149-202ENST00000389609 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
CCDC149-202ENST00000389609 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
CCDC149-202ENST00000389609 CCDC94Q9BW85 323 aaPredicted RBP13.74□□□□□ -0.21
CCDC149-202ENST00000389609 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
CCDC149-202ENST00000389609 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
CCDC149-202ENST00000389609 HOXC9P31274 260 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 MTX1Q13505 466 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 SGSM2O43147 1006 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 CNTROBQ8N137 903 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
CCDC149-202ENST00000389609 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
CCDC149-202ENST00000389609 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
CCDC149-202ENST00000389609 TRIM6-TRIM34B2RNG4 842 aa13.72□□□□□ -0.21
CCDC149-202ENST00000389609 TSHZ3Q63HK5 1081 aa13.72□□□□□ -0.21
CCDC149-202ENST00000389609 KCNA6P17658 529 aa13.72□□□□□ -0.21
CCDC149-202ENST00000389609 SASS6Q6UVJ0 657 aa13.72□□□□□ -0.21
CCDC149-202ENST00000389609 TM6SF1Q9BZW5 370 aa13.72□□□□□ -0.21
CCDC149-202ENST00000389609 RPAP1Q9BWH6 1393 aaPredicted RBP13.71□□□□□ -0.21
CCDC149-202ENST00000389609 SYCE3A1L190 88 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 PI4K2BQ8TCG2 481 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 KCNB2Q92953 911 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 TTC14Q96N46 770 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
CCDC149-202ENST00000389609 LMO7Q8WWI1 1683 aa13.71□□□□□ -0.22
CCDC149-202ENST00000389609 NLRP6P59044 892 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 PDE4CQ08493 712 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 IL17REQ8NFR9 667 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 RHPN1Q8TCX5 695 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 GLRX3O76003 335 aaKnown RBP13.7□□□□□ -0.22
CCDC149-202ENST00000389609 CCDC183Q5T5S1 534 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 HDGFL1Q5TGJ6 251 aa13.7□□□□□ -0.22
CCDC149-202ENST00000389609 THEMISQ8N1K5 641 aaPredicted RBP13.7□□□□□ -0.22
CCDC149-202ENST00000389609 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
CCDC149-202ENST00000389609 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
CCDC149-202ENST00000389609 ERC1Q8IUD2 1116 aa13.69□□□□□ -0.22
CCDC149-202ENST00000389609 ARID3AQ99856 593 aa13.69□□□□□ -0.22
CCDC149-202ENST00000389609 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
CCDC149-202ENST00000389609 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
CCDC149-202ENST00000389609 CHD2O14647 1828 aaKnown RBP13.69□□□□□ -0.22
CCDC149-202ENST00000389609 UBE2HP62256 183 aa13.69□□□□□ -0.22
CCDC149-202ENST00000389609 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
CCDC149-202ENST00000389609 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
CCDC149-202ENST00000389609 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
CCDC149-202ENST00000389609 HIP1O00291 1037 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 FOXD4L5Q5VV16 416 aaPredicted RBP13.67□□□□□ -0.22
CCDC149-202ENST00000389609 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 FOXD4L4Q8WXT5 416 aaPredicted RBP13.67□□□□□ -0.22
CCDC149-202ENST00000389609 NECTIN2Q92692 538 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 NFAT5O94916 1531 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
CCDC149-202ENST00000389609 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms