RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 XAGE3Q8WTP9 111 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 NOL7Q9UMY1 257 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 ADGRL2O95490 1459 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 IMMTQ16891 758 aaKnown RBP15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 MEIS3Q99687 375 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 FAM43AQ8N2R8 423 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 U3KPZ7 1027 aaPredicted RBP15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 KRT85P78386 507 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 DDB1Q16531 1140 aa15.32■□□□□ 0.04
PTPRN2-203ENST00000389418 IGHDP01880 384 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 RSPH6AQ9H0K4 717 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 ATP7AQ04656 1500 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 EPS15P42566 896 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 LARP1BQ659C4 914 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 EYA1Q99502 592 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 OFD1O75665 1012 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 MCM4P33991 863 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 FILIP1LQ4L180 1135 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 PRPF40BQ6NWY9 871 aaKnown RBP15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 RAB11FIP4Q86YS3 637 aa15.31■□□□□ 0.04
PTPRN2-203ENST00000389418 IBSPP21815 317 aaPredicted RBP15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 PPP1R42Q7Z4L9 355 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 ARHGAP45Q92619 1136 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 BRPF3Q9ULD4 1205 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 MAP3K19Q56UN5 1328 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 ATP6V1AP38606 617 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 USP5P45974 858 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 PDRG1Q9NUG6 133 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 ATP10AO60312 1499 aa15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 MPHOSPH10O00566 681 aaKnown RBP15.3■□□□□ 0.04
PTPRN2-203ENST00000389418 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 CFAP45Q9UL16 551 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 SNRPA1P09661 255 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 RFC4P35249 363 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 ASXL1Q8IXJ9 1541 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 HSP90AA2PQ14568 343 aaPredicted RBP15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 ZHX3Q9H4I2 956 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 DACH1Q9UI36 760 aa15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 CASTP20810 708 aaKnown RBP15.29■□□□□ 0.04
PTPRN2-203ENST00000389418 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 RPGRQ92834 1020 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 HAND2P61296 217 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 MAP3K12Q12852 859 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 SLF2Q8IX21 1173 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 TRIM5Q9C035 493 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 GOLIM4O00461 696 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 TRMT1LQ7Z2T5 733 aaKnown RBP15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 SLC5A1P13866 664 aa15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 HELBQ8NG08 1087 aaPredicted RBP15.28■□□□□ 0.04
PTPRN2-203ENST00000389418 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 LTKP29376 864 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 GUCY1B3Q02153 619 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 FAM13BQ9NYF5 915 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 JAG2Q9Y219 1238 aa15.27■□□□□ 0.04
PTPRN2-203ENST00000389418 STIM1Q13586 685 aa15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 CWF19L2Q2TBE0 894 aaKnown RBP15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC24Q8N4L8 307 aa15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 TSPY26PQ9H489 355 aa15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 PCDHB15Q9Y5E8 787 aa15.27■□□□□ 0.03
PTPRN2-203ENST00000389418 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 CHMP4BP1P59074 171 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 PA2G4Q9UQ80 394 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 NBPF6Q5VWK0 638 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 NBPF5PQ86XG9 351 aaPredicted RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 DZIP1Q86YF9 867 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 NBPF4Q96M43 638 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 PZPP20742 1482 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 F8W031 263 aaPredicted RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 CCP110O43303 1012 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 TTLL5Q6EMB2 1281 aa15.26■□□□□ 0.03
PTPRN2-203ENST00000389418 SSBP05455 408 aaKnown RBP eCLIP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 ME1P48163 572 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 DDX46Q7L014 1031 aaKnown RBP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 WWC2Q6AWC2 1192 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 SMARCE1Q969G3 411 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 TCEANC2Q96MN5 208 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 ARHGEF12Q9NZN5 1544 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 A0A1W2PP64 1363 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
PTPRN2-203ENST00000389418 POLR3DP05423 398 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms