RNA–Protein interactions for RNA: ENST00000382096.5

VLDLR-201, Transcript of very low density lipoprotein receptor, humanhuman

TSL 5

Gene VLDLR, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-201ENST00000382096 DNAJC10Q8IXB1 793 aa30.77■■■□□ 2.52
VLDLR-201ENST00000382096 CHRNA5P30532 468 aa30.76■■■□□ 2.51
VLDLR-201ENST00000382096 ZPR1O75312 459 aa30.75■■■□□ 2.51
VLDLR-201ENST00000382096 USPL1Q5W0Q7 1092 aa30.75■■■□□ 2.51
VLDLR-201ENST00000382096 LGR6Q9HBX8 967 aa30.75■■■□□ 2.51
VLDLR-201ENST00000382096 CYP19A1P11511 503 aaPredicted RBP30.74■■■□□ 2.51
VLDLR-201ENST00000382096 KDM2BQ8NHM5 1336 aa30.73■■■□□ 2.51
VLDLR-201ENST00000382096 RNF181Q9P0P0 153 aa30.73■■■□□ 2.51
VLDLR-201ENST00000382096 COL15A1P39059 1388 aa30.72■■■□□ 2.51
VLDLR-201ENST00000382096 RNMTO43148 476 aaKnown RBP30.72■■■□□ 2.51
VLDLR-201ENST00000382096 C16orf71Q8IYS4 520 aaPredicted RBP30.71■■■□□ 2.51
VLDLR-201ENST00000382096 CCDC88AQ3V6T2 1871 aa30.71■■■□□ 2.51
VLDLR-201ENST00000382096 NPC1L1Q9UHC9 1359 aa30.7■■■□□ 2.51
VLDLR-201ENST00000382096 SLC39A6Q13433 755 aa30.7■■■□□ 2.51
VLDLR-201ENST00000382096 NARFQ9UHQ1 456 aa30.7■■■□□ 2.51
VLDLR-201ENST00000382096 FSTL1Q12841 308 aa30.69■■■□□ 2.5
VLDLR-201ENST00000382096 TIAM2Q8IVF5 1701 aa30.68■■■□□ 2.5
VLDLR-201ENST00000382096 NFIXQ14938 502 aa30.68■■■□□ 2.5
VLDLR-201ENST00000382096 HMOX1P09601 288 aa30.67■■■□□ 2.5
VLDLR-201ENST00000382096 VSIG10Q8N0Z9 540 aa30.67■■■□□ 2.5
VLDLR-201ENST00000382096 ZBTB1Q9Y2K1 713 aa30.67■■■□□ 2.5
VLDLR-201ENST00000382096 ZC3H4Q9UPT8 1303 aaKnown RBP30.67■■■□□ 2.5
VLDLR-201ENST00000382096 SIPA1L3O60292 1781 aaPredicted RBP30.66■■■□□ 2.5
VLDLR-201ENST00000382096 MTHFSDQ2M296 383 aaKnown RBP30.65■■■□□ 2.5
VLDLR-201ENST00000382096 CC2D1BQ5T0F9 858 aaKnown RBP30.65■■■□□ 2.5
VLDLR-201ENST00000382096 BCL2L12Q9HB09 334 aa30.64■■■□□ 2.5
VLDLR-201ENST00000382096 SCN7AQ01118 1682 aa30.64■■■□□ 2.5
VLDLR-201ENST00000382096 ANKRD31Q8N7Z5 1873 aa30.63■■■□□ 2.49
VLDLR-201ENST00000382096 RRAGCQ9HB90 399 aa30.63■■■□□ 2.49
VLDLR-201ENST00000382096 PCNTO95613 3336 aa30.62■■■□□ 2.49
VLDLR-201ENST00000382096 SERPINB2P05120 415 aa30.61■■■□□ 2.49
VLDLR-201ENST00000382096 RASSF7Q02833 373 aa30.61■■■□□ 2.49
VLDLR-201ENST00000382096 DIAPH1O60610 1272 aaKnown RBP30.6■■■□□ 2.49
VLDLR-201ENST00000382096 KLRG1Q96E93 195 aa30.59■■■□□ 2.49
VLDLR-201ENST00000382096 DICER1Q9UPY3 1922 aaKnown RBP30.59■■■□□ 2.49
VLDLR-201ENST00000382096 COL3A1P02461 1466 aaPredicted RBP30.58■■■□□ 2.49
VLDLR-201ENST00000382096 CARMIL3Q8ND23 1372 aa30.58■■■□□ 2.49
VLDLR-201ENST00000382096 LMNB1P20700 586 aa30.58■■■□□ 2.49
VLDLR-201ENST00000382096 HTRA3P83110 453 aa30.58■■■□□ 2.49
VLDLR-201ENST00000382096 COL11A2P13942 1736 aaPredicted RBP30.57■■■□□ 2.48
VLDLR-201ENST00000382096 TTLL6Q8N841 843 aa30.57■■■□□ 2.48
VLDLR-201ENST00000382096 JMYQ8N9B5 988 aa30.57■■■□□ 2.48
VLDLR-201ENST00000382096 CANXP27824 592 aaKnown RBP30.56■■■□□ 2.48
VLDLR-201ENST00000382096 PRELPP51888 382 aa30.56■■■□□ 2.48
VLDLR-201ENST00000382096 EIF5P55010 431 aaKnown RBP30.56■■■□□ 2.48
VLDLR-201ENST00000382096 FER1L6Q2WGJ9 1857 aa30.55■■■□□ 2.48
VLDLR-201ENST00000382096 SMC1BQ8NDV3 1235 aa30.55■■■□□ 2.48
VLDLR-201ENST00000382096 STARD3NLO95772 234 aa30.54■■■□□ 2.48
VLDLR-201ENST00000382096 C2CD5Q86YS7 1000 aa30.54■■■□□ 2.48
VLDLR-201ENST00000382096 TTC5Q8N0Z6 440 aa30.54■■■□□ 2.48
VLDLR-201ENST00000382096 GLTPD2A6NH11 291 aa30.53■■■□□ 2.48
VLDLR-201ENST00000382096 A0A087WZG4 1122 aa30.52■■■□□ 2.48
VLDLR-201ENST00000382096 H0YIN7 160 aa30.52■■■□□ 2.48
VLDLR-201ENST00000382096 BCORQ6W2J9 1755 aa30.51■■■□□ 2.48
VLDLR-201ENST00000382096 HEG1Q9ULI3 1381 aa30.51■■■□□ 2.47
VLDLR-201ENST00000382096 CACNA1SQ13698 1873 aa30.5■■■□□ 2.47
VLDLR-201ENST00000382096 NFKBIEO00221 500 aa30.5■■■□□ 2.47
VLDLR-201ENST00000382096 ZNF496Q96IT1 587 aaPredicted RBP30.5■■■□□ 2.47
VLDLR-201ENST00000382096 ARFGEF2Q9Y6D5 1785 aa30.49■■■□□ 2.47
VLDLR-201ENST00000382096 VEGFAP15692 232 aaPredicted RBP30.49■■■□□ 2.47
VLDLR-201ENST00000382096 ZNF790Q6PG37 636 aa30.49■■■□□ 2.47
VLDLR-201ENST00000382096 BICDL1Q6ZP65 573 aa30.49■■■□□ 2.47
VLDLR-201ENST00000382096 TEX13AQ9BXU3 409 aaPredicted RBP30.48■■■□□ 2.47
VLDLR-201ENST00000382096 GNAT3A8MTJ3 354 aa30.47■■■□□ 2.47
VLDLR-201ENST00000382096 TEFQ10587 303 aa30.47■■■□□ 2.47
VLDLR-201ENST00000382096 TBC1D9BQ66K14 1250 aa30.47■■■□□ 2.47
VLDLR-201ENST00000382096 IL17REQ8NFR9 667 aa30.47■■■□□ 2.47
VLDLR-201ENST00000382096 PDZRN3Q9UPQ7 1066 aa30.47■■■□□ 2.47
VLDLR-201ENST00000382096 GAS2L2Q8NHY3 880 aa30.46■■■□□ 2.47
VLDLR-201ENST00000382096 BRIP1Q9BX63 1249 aa30.45■■■□□ 2.47
VLDLR-201ENST00000382096 IL6STP40189 918 aaPredicted RBP30.44■■■□□ 2.46
VLDLR-201ENST00000382096 CEMIPQ8WUJ3 1361 aa30.43■■■□□ 2.46
VLDLR-201ENST00000382096 PDE6BP35913 854 aa30.43■■■□□ 2.46
VLDLR-201ENST00000382096 PRR5LQ6MZQ0 368 aa30.43■■■□□ 2.46
VLDLR-201ENST00000382096 SLX4Q8IY92 1834 aa30.43■■■□□ 2.46
VLDLR-201ENST00000382096 U2SURPO15042 1029 aaKnown RBP30.42■■■□□ 2.46
VLDLR-201ENST00000382096 TBC1D2BQ9UPU7 963 aa30.42■■■□□ 2.46
VLDLR-201ENST00000382096 CNGB1Q14028 1251 aaPredicted RBP30.41■■■□□ 2.46
VLDLR-201ENST00000382096 COL13A1Q5TAT6 717 aaPredicted RBP30.4■■■□□ 2.46
VLDLR-201ENST00000382096 ZNF622Q969S3 477 aaKnown RBP eCLIP30.4■■■□□ 2.46
VLDLR-201ENST00000382096 FMNL2Q96PY5 1086 aa30.4■■■□□ 2.46
VLDLR-201ENST00000382096 ZNF330Q9Y3S2 320 aaPredicted RBP30.4■■■□□ 2.46
VLDLR-201ENST00000382096 POTECB2RU33 542 aa30.39■■■□□ 2.46
VLDLR-201ENST00000382096 C21orf2O43822 256 aa30.38■■■□□ 2.45
VLDLR-201ENST00000382096 DPY19L2Q6NUT2 758 aa30.38■■■□□ 2.45
VLDLR-201ENST00000382096 LTBP3Q9NS15 1303 aa30.38■■■□□ 2.45
VLDLR-201ENST00000382096 CAMTA2O94983 1202 aa30.37■■■□□ 2.45
VLDLR-201ENST00000382096 A1BGP04217 495 aa30.36■■■□□ 2.45
VLDLR-201ENST00000382096 CCDC24Q8N4L8 307 aa30.36■■■□□ 2.45
VLDLR-201ENST00000382096 ERFEQ4G0M1 354 aa30.35■■■□□ 2.45
VLDLR-201ENST00000382096 CNBD1Q8NA66 436 aa30.35■■■□□ 2.45
VLDLR-201ENST00000382096 CFAP53Q96M91 514 aa30.35■■■□□ 2.45
VLDLR-201ENST00000382096 SETDB2Q96T68 719 aa30.35■■■□□ 2.45
VLDLR-201ENST00000382096 NPM2Q86SE8 214 aaKnown RBP30.33■■■□□ 2.45
VLDLR-201ENST00000382096 ZNF219Q9P2Y4 722 aaPredicted RBP30.33■■■□□ 2.45
VLDLR-201ENST00000382096 BTBD11A6QL63 1104 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 PPP2R1AP30153 589 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 STYK1Q6J9G0 422 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 CNKSR1Q969H4 720 aa30.32■■■□□ 2.44
VLDLR-201ENST00000382096 PHACTR3Q96KR7 559 aa30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms