RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 STARD3NLO95772 234 aa17.39■□□□□ 0.37
RPAIN-202ENST00000381208 SLC39A6Q13433 755 aa17.39■□□□□ 0.37
RPAIN-202ENST00000381208 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
RPAIN-202ENST00000381208 TEX13AQ9BXU3 409 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-202ENST00000381208 ADAMTS7Q9UKP4 1686 aa17.38■□□□□ 0.37
RPAIN-202ENST00000381208 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
RPAIN-202ENST00000381208 PXDNLA1KZ92 1463 aa17.38■□□□□ 0.37
RPAIN-202ENST00000381208 TJP1Q07157 1748 aa17.37■□□□□ 0.37
RPAIN-202ENST00000381208 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 C4AP0C0L4 1744 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 FKBP8Q14318 412 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 ZNF790Q6PG37 636 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 IL17REQ8NFR9 667 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 SRP68Q9UHB9 627 aaKnown RBP17.36■□□□□ 0.37
RPAIN-202ENST00000381208 NARFQ9UHQ1 456 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 KCPQ6ZWJ8 1503 aa17.36■□□□□ 0.37
RPAIN-202ENST00000381208 ADCY9O60503 1353 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 A0A087WZG4 1122 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 FCHSD2O94868 740 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 PPP2R1AP30153 589 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 PRKAR2BP31323 418 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
RPAIN-202ENST00000381208 COL15A1P39059 1388 aa17.34■□□□□ 0.37
RPAIN-202ENST00000381208 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
RPAIN-202ENST00000381208 TM4SF1P30408 202 aa17.34■□□□□ 0.37
RPAIN-202ENST00000381208 GPBP1L1Q9HC44 474 aaPredicted RBP17.34■□□□□ 0.37
RPAIN-202ENST00000381208 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
RPAIN-202ENST00000381208 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.37
RPAIN-202ENST00000381208 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-202ENST00000381208 DPEP1P16444 411 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.36
RPAIN-202ENST00000381208 USPL1Q5W0Q7 1092 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
RPAIN-202ENST00000381208 FMNL2Q96PY5 1086 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 PIM2Q9P1W9 311 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 WWC3Q9ULE0 1092 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 HEG1Q9ULI3 1381 aa17.33■□□□□ 0.36
RPAIN-202ENST00000381208 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
RPAIN-202ENST00000381208 DDR1Q08345 913 aa17.32■□□□□ 0.36
RPAIN-202ENST00000381208 HTATSF1O43719 755 aaKnown RBP17.31■□□□□ 0.36
RPAIN-202ENST00000381208 NEFMP07197 916 aa17.31■□□□□ 0.36
RPAIN-202ENST00000381208 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
RPAIN-202ENST00000381208 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
RPAIN-202ENST00000381208 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
RPAIN-202ENST00000381208 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
RPAIN-202ENST00000381208 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
RPAIN-202ENST00000381208 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
RPAIN-202ENST00000381208 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
RPAIN-202ENST00000381208 BTBD11A6QL63 1104 aa17.29■□□□□ 0.36
RPAIN-202ENST00000381208 ZBTB22O15209 634 aa17.29■□□□□ 0.36
RPAIN-202ENST00000381208 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
RPAIN-202ENST00000381208 UBR2Q8IWV8 1755 aa17.29■□□□□ 0.36
RPAIN-202ENST00000381208 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
RPAIN-202ENST00000381208 KCNA3P22001 575 aa17.28■□□□□ 0.36
RPAIN-202ENST00000381208 NFIXQ14938 502 aa17.28■□□□□ 0.36
RPAIN-202ENST00000381208 ARHGAP27Q6ZUM4 889 aa17.28■□□□□ 0.36
RPAIN-202ENST00000381208 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
RPAIN-202ENST00000381208 SERPINB2P05120 415 aa17.27■□□□□ 0.35
RPAIN-202ENST00000381208 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.35
RPAIN-202ENST00000381208 PDZRN3Q9UPQ7 1066 aa17.27■□□□□ 0.35
RPAIN-202ENST00000381208 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
RPAIN-202ENST00000381208 BCL2L12Q9HB09 334 aa17.26■□□□□ 0.35
RPAIN-202ENST00000381208 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
RPAIN-202ENST00000381208 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-202ENST00000381208 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-202ENST00000381208 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-202ENST00000381208 CHRNA5P30532 468 aa17.23■□□□□ 0.35
RPAIN-202ENST00000381208 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
RPAIN-202ENST00000381208 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
RPAIN-202ENST00000381208 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
RPAIN-202ENST00000381208 MCM10Q7L590 875 aa17.22■□□□□ 0.35
RPAIN-202ENST00000381208 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
RPAIN-202ENST00000381208 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 H0YIN7 160 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 RGL2O15211 777 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 A1BGP04217 495 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 C9orf131Q5VYM1 1079 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
RPAIN-202ENST00000381208 CARMIL3Q8ND23 1372 aa17.21■□□□□ 0.34
RPAIN-202ENST00000381208 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 KCNQ3O43525 872 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 PDE6BP35913 854 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 RALBP1Q15311 655 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 SETDB2Q96T68 719 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
RPAIN-202ENST00000381208 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
RPAIN-202ENST00000381208 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
RPAIN-202ENST00000381208 C2CD5Q86YS7 1000 aa17.19■□□□□ 0.34
RPAIN-202ENST00000381208 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
RPAIN-202ENST00000381208 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
RPAIN-202ENST00000381208 ZC3H4Q9UPT8 1303 aaKnown RBP17.19■□□□□ 0.34
RPAIN-202ENST00000381208 KIF3CO14782 793 aa17.18■□□□□ 0.34
RPAIN-202ENST00000381208 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
RPAIN-202ENST00000381208 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
RPAIN-202ENST00000381208 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms