RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 PROSER3Q2NL68 480 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 DDX21Q9NR30 783 aaKnown RBP eCLIP24.85■■□□□ 1.57
CCM2-202ENST00000381112 CACNA1FO60840 1977 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 C5P01031 1676 aa24.85■■□□□ 1.57
CCM2-202ENST00000381112 USP16Q9Y5T5 823 aa24.84■■□□□ 1.57
CCM2-202ENST00000381112 CCT4P50991 539 aaKnown RBP24.83■■□□□ 1.57
CCM2-202ENST00000381112 HYPKQ9NX55 129 aa24.83■■□□□ 1.57
CCM2-202ENST00000381112 UBR2Q8IWV8 1755 aa24.83■■□□□ 1.57
CCM2-202ENST00000381112 SLC4A10Q6U841 1118 aa24.82■■□□□ 1.56
CCM2-202ENST00000381112 ATG3Q9NT62 314 aa24.82■■□□□ 1.56
CCM2-202ENST00000381112 ASAP1Q9ULH1 1129 aa24.82■■□□□ 1.56
CCM2-202ENST00000381112 PTCD1O75127 700 aaKnown RBP24.81■■□□□ 1.56
CCM2-202ENST00000381112 PRIM1P49642 420 aaKnown RBP24.81■■□□□ 1.56
CCM2-202ENST00000381112 PXDNLA1KZ92 1463 aa24.8■■□□□ 1.56
CCM2-202ENST00000381112 ATRNO75882 1429 aa24.79■■□□□ 1.56
CCM2-202ENST00000381112 GJD4Q96KN9 370 aaPredicted RBP24.79■■□□□ 1.56
CCM2-202ENST00000381112 RWDD1Q9H446 243 aaPredicted RBP24.79■■□□□ 1.56
CCM2-202ENST00000381112 HDAC1Q13547 482 aaPredicted RBP24.78■■□□□ 1.56
CCM2-202ENST00000381112 SYTL4Q96C24 671 aaPredicted RBP24.78■■□□□ 1.56
CCM2-202ENST00000381112 ADCY9O60503 1353 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 PI4KAP2A4QPH2 592 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 LRP10Q7Z4F1 713 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 PI4KAP1Q8N8J0 262 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 TRPC5Q9UL62 973 aaPredicted RBP24.77■■□□□ 1.56
CCM2-202ENST00000381112 ITGB4P16144 1822 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 ERBB4Q15303 1308 aa24.77■■□□□ 1.56
CCM2-202ENST00000381112 VSIG10Q8N0Z9 540 aa24.76■■□□□ 1.55
CCM2-202ENST00000381112 DNAAF4Q8WXU2 420 aa24.76■■□□□ 1.55
CCM2-202ENST00000381112 THSD7AQ9UPZ6 1657 aa24.76■■□□□ 1.55
CCM2-202ENST00000381112 DOT1LQ8TEK3 1739 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 MEIS3Q99687 375 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 C1orf115Q9H7X2 142 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 LAMB4A4D0S4 1761 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 MYL6BP14649 208 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 KSR2Q6VAB6 950 aa24.75■■□□□ 1.55
CCM2-202ENST00000381112 ONECUT3O60422 494 aaPredicted RBP24.73■■□□□ 1.55
CCM2-202ENST00000381112 ACSBG1Q96GR2 724 aa24.73■■□□□ 1.55
CCM2-202ENST00000381112 A0A0G2JS52 829 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 DDX58O95786 925 aaKnown RBP24.72■■□□□ 1.55
CCM2-202ENST00000381112 MYT1Q01538 1121 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 ATP10DQ9P241 1426 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 BEND3Q5T5X7 828 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 NBPF14Q5TI25 921 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
CCM2-202ENST00000381112 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 XAGE3Q8WTP9 111 aa24.72■■□□□ 1.55
CCM2-202ENST00000381112 TEX13AQ9BXU3 409 aaPredicted RBP24.72■■□□□ 1.55
CCM2-202ENST00000381112 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
CCM2-202ENST00000381112 SRCIN1Q9C0H9 1055 aa24.71■■□□□ 1.55
CCM2-202ENST00000381112 MAP3K2Q9Y2U5 619 aa24.71■■□□□ 1.55
CCM2-202ENST00000381112 AIMP1Q12904 312 aaKnown RBP24.7■■□□□ 1.55
CCM2-202ENST00000381112 COPS6Q7L5N1 327 aa24.7■■□□□ 1.55
CCM2-202ENST00000381112 RBM42Q9BTD8 480 aaKnown RBP24.7■■□□□ 1.55
CCM2-202ENST00000381112 SIRT2Q8IXJ6 389 aa24.7■■□□□ 1.54
CCM2-202ENST00000381112 QTRT2Q9H974 415 aaKnown RBP24.7■■□□□ 1.54
CCM2-202ENST00000381112 N4BP2Q86UW6 1770 aaPredicted RBP24.7■■□□□ 1.54
CCM2-202ENST00000381112 A1BGP04217 495 aa24.69■■□□□ 1.54
CCM2-202ENST00000381112 DNAJC10Q8IXB1 793 aa24.69■■□□□ 1.54
CCM2-202ENST00000381112 SLC4A9Q96Q91 983 aa24.69■■□□□ 1.54
CCM2-202ENST00000381112 GNAI3P08754 354 aa24.68■■□□□ 1.54
CCM2-202ENST00000381112 SKAP1Q86WV1 359 aa24.68■■□□□ 1.54
CCM2-202ENST00000381112 USP44Q9H0E7 712 aa24.68■■□□□ 1.54
CCM2-202ENST00000381112 KCNQ2O43526 872 aa24.66■■□□□ 1.54
CCM2-202ENST00000381112 STARD3NLO95772 234 aa24.66■■□□□ 1.54
CCM2-202ENST00000381112 SMC5Q8IY18 1101 aa24.66■■□□□ 1.54
CCM2-202ENST00000381112 ANKRD44Q8N8A2 993 aa24.66■■□□□ 1.54
CCM2-202ENST00000381112 ALDH1L1O75891 902 aa24.65■■□□□ 1.54
CCM2-202ENST00000381112 GNAI2P04899 355 aa24.65■■□□□ 1.54
CCM2-202ENST00000381112 CEP85Q6P2H3 762 aa24.65■■□□□ 1.54
CCM2-202ENST00000381112 ANKRD13DQ6ZTN6 518 aa24.65■■□□□ 1.54
CCM2-202ENST00000381112 RIC3Q7Z5B4 369 aa24.65■■□□□ 1.54
CCM2-202ENST00000381112 RPAP2Q8IXW5 612 aaPredicted RBP24.65■■□□□ 1.54
CCM2-202ENST00000381112 SEPT12Q8IYM1 358 aa24.64■■□□□ 1.54
CCM2-202ENST00000381112 LINS1Q8NG48 757 aa24.64■■□□□ 1.53
CCM2-202ENST00000381112 CYP19A1P11511 503 aaPredicted RBP24.63■■□□□ 1.53
CCM2-202ENST00000381112 METTL22Q9BUU2 404 aaPredicted RBP24.62■■□□□ 1.53
CCM2-202ENST00000381112 PLBD2Q8NHP8 589 aa24.62■■□□□ 1.53
CCM2-202ENST00000381112 SMARCC1Q92922 1105 aaPredicted RBP24.62■■□□□ 1.53
CCM2-202ENST00000381112 IBTKQ9P2D0 1353 aaPredicted RBP24.61■■□□□ 1.53
CCM2-202ENST00000381112 UBTFL1P0CB47 393 aaPredicted RBP24.61■■□□□ 1.53
CCM2-202ENST00000381112 PDZRN3Q9UPQ7 1066 aa24.61■■□□□ 1.53
CCM2-202ENST00000381112 PALLDQ8WX93 1383 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 KAT6BQ8WYB5 2073 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 LOC102724428A0A0B4J2F2 783 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 IGKV5-2P06315 115 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 SIK1P57059 783 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 CWF19L2Q2TBE0 894 aaKnown RBP24.6■■□□□ 1.53
CCM2-202ENST00000381112 TTLL7Q6ZT98 887 aa24.6■■□□□ 1.53
CCM2-202ENST00000381112 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
CCM2-202ENST00000381112 GCC1Q96CN9 775 aa24.59■■□□□ 1.53
CCM2-202ENST00000381112 NBPF7P0C2Y1 421 aaPredicted RBP24.58■■□□□ 1.53
CCM2-202ENST00000381112 FAM182BQ5T319 152 aa24.58■■□□□ 1.53
CCM2-202ENST00000381112 LRRFIP2Q9Y608 721 aaKnown RBP24.58■■□□□ 1.53
CCM2-202ENST00000381112 TJP1Q07157 1748 aa24.58■■□□□ 1.53
CCM2-202ENST00000381112 ZNF772Q68DY9 489 aaPredicted RBP24.58■■□□□ 1.52
CCM2-202ENST00000381112 PTF1AQ7RTS3 328 aa24.57■■□□□ 1.52
CCM2-202ENST00000381112 MYD88Q99836 296 aa24.57■■□□□ 1.52
CCM2-202ENST00000381112 NEURL1BA8MQ27 555 aa24.56■■□□□ 1.52
CCM2-202ENST00000381112 ATP6V1AP38606 617 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms