RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ITGB4P16144 1822 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 NFATC2IPQ8NCF5 419 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 LGR6Q9HBX8 967 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 ATG3Q9NT62 314 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 CD2APQ9Y5K6 639 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 ADCY9O60503 1353 aa12.26□□□□□ -0.45
HMGN1-202ENST00000380747 RIOK3O14730 519 aaKnown RBP12.25□□□□□ -0.45
HMGN1-202ENST00000380747 ANP32CO43423 234 aa12.25□□□□□ -0.45
HMGN1-202ENST00000380747 CHRM1P11229 460 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-202ENST00000380747 WDR43Q15061 677 aaKnown RBP eCLIP12.25□□□□□ -0.45
HMGN1-202ENST00000380747 PYGBP11216 843 aa12.24□□□□□ -0.45
HMGN1-202ENST00000380747 COL23A1Q86Y22 540 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-202ENST00000380747 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
HMGN1-202ENST00000380747 TSPYL2Q9H2G4 693 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-202ENST00000380747 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
HMGN1-202ENST00000380747 SLC52A2Q9HAB3 445 aa12.24□□□□□ -0.45
HMGN1-202ENST00000380747 MAPK8IP3Q9UPT6 1336 aa12.24□□□□□ -0.45
HMGN1-202ENST00000380747 LOC102724428A0A0B4J2F2 783 aa12.23□□□□□ -0.45
HMGN1-202ENST00000380747 HSPA6P17066 643 aa12.23□□□□□ -0.45
HMGN1-202ENST00000380747 SIK1P57059 783 aa12.23□□□□□ -0.45
HMGN1-202ENST00000380747 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-202ENST00000380747 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
HMGN1-202ENST00000380747 GPBP1L1Q9HC44 474 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-202ENST00000380747 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
HMGN1-202ENST00000380747 ATP6V1AP38606 617 aa12.22□□□□□ -0.45
HMGN1-202ENST00000380747 TEFQ10587 303 aa12.22□□□□□ -0.45
HMGN1-202ENST00000380747 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
HMGN1-202ENST00000380747 PLEKHF1Q96S99 279 aa12.22□□□□□ -0.45
HMGN1-202ENST00000380747 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
HMGN1-202ENST00000380747 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
HMGN1-202ENST00000380747 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.45
HMGN1-202ENST00000380747 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
HMGN1-202ENST00000380747 MRC1P22897 1456 aa12.21□□□□□ -0.46
HMGN1-202ENST00000380747 SLC39A6Q13433 755 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 ITPK1Q13572 414 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 DCTN1Q14203 1278 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 NFE2L2Q16236 605 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 MCM10Q7L590 875 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 AK7Q96M32 723 aa12.2□□□□□ -0.46
HMGN1-202ENST00000380747 HTATSF1O43719 755 aaKnown RBP12.19□□□□□ -0.46
HMGN1-202ENST00000380747 CCDC184Q52MB2 194 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 TTC5Q8N0Z6 440 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 LINC00116Q8NCU8 138 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 SLC4A9Q96Q91 983 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 ADAMTS8Q9UP79 889 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 C5P01031 1676 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 ADAMTS7Q9UKP4 1686 aa12.19□□□□□ -0.46
HMGN1-202ENST00000380747 MSL1Q68DK7 614 aa12.18□□□□□ -0.46
HMGN1-202ENST00000380747 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
HMGN1-202ENST00000380747 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
HMGN1-202ENST00000380747 PHF14O94880 888 aa12.17□□□□□ -0.46
HMGN1-202ENST00000380747 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
HMGN1-202ENST00000380747 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
HMGN1-202ENST00000380747 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 GNPATO15228 680 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 RIPK4P57078 832 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 NEUROD2Q15784 382 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 RRP7AQ9Y3A4 280 aaKnown RBP12.16□□□□□ -0.46
HMGN1-202ENST00000380747 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
HMGN1-202ENST00000380747 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
HMGN1-202ENST00000380747 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
HMGN1-202ENST00000380747 ZNF790Q6PG37 636 aa12.15□□□□□ -0.46
HMGN1-202ENST00000380747 DNAJC10Q8IXB1 793 aa12.15□□□□□ -0.46
HMGN1-202ENST00000380747 SPRYD3Q8NCJ5 442 aa12.15□□□□□ -0.46
HMGN1-202ENST00000380747 THUMPD2Q9BTF0 503 aaKnown RBP12.15□□□□□ -0.46
HMGN1-202ENST00000380747 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
HMGN1-202ENST00000380747 PCNTO95613 3336 aa12.15□□□□□ -0.46
HMGN1-202ENST00000380747 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
HMGN1-202ENST00000380747 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.14□□□□□ -0.47
HMGN1-202ENST00000380747 KIF3CO14782 793 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 KCNQ3O43525 872 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 SSFA2P28290 1259 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 LMOD3Q0VAK6 560 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 AMIGO3Q86WK7 504 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 ZNF496Q96IT1 587 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-202ENST00000380747 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
HMGN1-202ENST00000380747 CNTNAP4Q9C0A0 1308 aa12.13□□□□□ -0.47
HMGN1-202ENST00000380747 CRKLP46109 303 aaKnown RBP12.13□□□□□ -0.47
HMGN1-202ENST00000380747 TAF7Q15545 349 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-202ENST00000380747 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
HMGN1-202ENST00000380747 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
HMGN1-202ENST00000380747 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
HMGN1-202ENST00000380747 MIS18AQ9NYP9 233 aa12.13□□□□□ -0.47
HMGN1-202ENST00000380747 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
HMGN1-202ENST00000380747 ZNF831Q5JPB2 1677 aa12.13□□□□□ -0.47
HMGN1-202ENST00000380747 STK25O00506 426 aa12.12□□□□□ -0.47
HMGN1-202ENST00000380747 APLP1P51693 650 aa12.12□□□□□ -0.47
HMGN1-202ENST00000380747 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
HMGN1-202ENST00000380747 ZNF526Q8TF50 670 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-202ENST00000380747 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
HMGN1-202ENST00000380747 SIPA1L3O60292 1781 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-202ENST00000380747 TJP1Q07157 1748 aa12.11□□□□□ -0.47
HMGN1-202ENST00000380747 UBR3Q6ZT12 1888 aa12.11□□□□□ -0.47
HMGN1-202ENST00000380747 APAF1O14727 1248 aa12.11□□□□□ -0.47
HMGN1-202ENST00000380747 RPS6KA4O75676 772 aa12.11□□□□□ -0.47
HMGN1-202ENST00000380747 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-202ENST00000380747 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms