RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 TRPM2O94759 1503 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 KIF4AO95239 1232 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 AMPD3Q01432 767 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 CERS3Q8IU89 383 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 SCLT1Q96NL6 688 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
CCDC171-201ENST00000380701 MX1P20591 662 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 TMTC2Q8N394 836 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 ZHX3Q9H4I2 956 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 GOLGA6L10A6NI86 522 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 ALDH1L1O75891 902 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
CCDC171-201ENST00000380701 TANGO6Q9C0B7 1094 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 HMG20BQ9P0W2 317 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 RALGAPBQ86X10 1494 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
CCDC171-201ENST00000380701 SERPINC1P01008 464 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 MAP7D2Q96T17 732 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 FEZ1Q99689 392 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 MYD88Q99836 296 aa8.37□□□□□ -1.07
CCDC171-201ENST00000380701 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
CCDC171-201ENST00000380701 PPIP5K1Q6PFW1 1433 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 ZCRB1Q8TBF4 217 aaKnown RBP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 WDR7Q9Y4E6 1490 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 KIF2AO00139 706 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 ERLIN1O75477 346 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 FERMT2Q96AC1 680 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 SCAND2PQ9GZW5 306 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 MATR3P43243 847 aaKnown RBP eCLIP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 TNMDQ9H2S6 317 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 ASXL2Q76L83 1435 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 PTPN23Q9H3S7 1636 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 CTAGE5O15320 804 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 FOSBP53539 338 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 XPCQ01831 940 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 SLFN5Q08AF3 891 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC96Q2M329 555 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 NBPF6Q5VWK0 638 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 NBPF5PQ86XG9 351 aaPredicted RBP8.36□□□□□ -1.07
CCDC171-201ENST00000380701 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 EVI5LQ96CN4 794 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 NBPF4Q96M43 638 aa8.36□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC194A0A1B0GVG4 234 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 FKBP15Q5T1M5 1219 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 TAF4BQ92750 862 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 JAKMIP1Q96N16 626 aaKnown RBP8.35□□□□□ -1.07
CCDC171-201ENST00000380701 SSBP05455 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC181Q5TID7 509 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 NLRP3Q96P20 1036 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 TSHZ2Q9NRE2 1034 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 NOS1P29475 1434 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 DDB1Q16531 1140 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 SPATA32Q96LK8 384 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 FERMT1Q9BQL6 677 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 ZNF213O14771 459 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 WAPLQ7Z5K2 1190 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 ERMNQ8TAM6 284 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
CCDC171-201ENST00000380701 SETDB2Q96T68 719 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 CWC15Q9P013 229 aaKnown RBP8.35□□□□□ -1.07
CCDC171-201ENST00000380701 TBX22Q9Y458 520 aa8.35□□□□□ -1.07
CCDC171-201ENST00000380701 SLC12A7Q9Y666 1083 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 NASPP49321 788 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 CNNM2Q9H8M5 875 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 BABAM1Q9NWV8 329 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 CCDC148Q8NFR7 591 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 LRRC45Q96CN5 670 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 RIMS2Q9UQ26 1411 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 EPB41L2O43491 1005 aaKnown RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 PAXIP1Q6ZW49 1069 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 APBB1IPQ7Z5R6 666 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 NME9Q86XW9 330 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 C16orf71Q8IYS4 520 aaPredicted RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 SH2D4AQ9H788 454 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 RTN4Q9NQC3 1192 aaKnown RBP8.34□□□□□ -1.07
CCDC171-201ENST00000380701 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
CCDC171-201ENST00000380701 CAVIN2O95810 425 aa8.34□□□□□ -1.08
CCDC171-201ENST00000380701 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.08
CCDC171-201ENST00000380701 TPTE2Q6XPS3 522 aa8.34□□□□□ -1.08
CCDC171-201ENST00000380701 NAP1L4Q99733 375 aaKnown RBP8.34□□□□□ -1.08
CCDC171-201ENST00000380701 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.33□□□□□ -1.08
CCDC171-201ENST00000380701 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 LDHAL6AQ6ZMR3 332 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 JDP2Q8WYK2 163 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 ACEP12821 1306 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 CCDC172P0C7W6 258 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 PDE6BP35913 854 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 TNNI2P48788 182 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
CCDC171-201ENST00000380701 FIBPO43427 364 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms