RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ZBTB1Q9Y2K1 713 aa31.22■■■□□ 2.59
U2AF1-202ENST00000380276 KCPQ6ZWJ8 1503 aa31.22■■■□□ 2.59
U2AF1-202ENST00000380276 TOMM70O94826 608 aa31.21■■■□□ 2.59
U2AF1-202ENST00000380276 RNF181Q9P0P0 153 aa31.21■■■□□ 2.59
U2AF1-202ENST00000380276 U2SURPO15042 1029 aaKnown RBP31.2■■■□□ 2.59
U2AF1-202ENST00000380276 C16orf71Q8IYS4 520 aaPredicted RBP31.2■■■□□ 2.59
U2AF1-202ENST00000380276 TTC5Q8N0Z6 440 aa31.2■■■□□ 2.59
U2AF1-202ENST00000380276 CANXP27824 592 aaKnown RBP31.19■■■□□ 2.58
U2AF1-202ENST00000380276 NARFQ9UHQ1 456 aa31.19■■■□□ 2.58
U2AF1-202ENST00000380276 APLP1P51693 650 aa31.17■■■□□ 2.58
U2AF1-202ENST00000380276 NFIXQ14938 502 aa31.17■■■□□ 2.58
U2AF1-202ENST00000380276 PER1O15534 1290 aaPredicted RBP31.16■■■□□ 2.58
U2AF1-202ENST00000380276 IFFO2Q5TF58 517 aa31.16■■■□□ 2.58
U2AF1-202ENST00000380276 TEFQ10587 303 aa31.14■■■□□ 2.58
U2AF1-202ENST00000380276 VSIG10Q8N0Z9 540 aa31.14■■■□□ 2.58
U2AF1-202ENST00000380276 KDM2BQ8NHM5 1336 aa31.14■■■□□ 2.58
U2AF1-202ENST00000380276 AFDNP55196 1824 aaKnown RBP31.14■■■□□ 2.58
U2AF1-202ENST00000380276 SERPINB2P05120 415 aa31.13■■■□□ 2.57
U2AF1-202ENST00000380276 BICDL1Q6ZP65 573 aa31.13■■■□□ 2.57
U2AF1-202ENST00000380276 ZNF330Q9Y3S2 320 aaPredicted RBP31.13■■■□□ 2.57
U2AF1-202ENST00000380276 STARD3NLO95772 234 aa31.12■■■□□ 2.57
U2AF1-202ENST00000380276 UBR2Q8IWV8 1755 aa31.11■■■□□ 2.57
U2AF1-202ENST00000380276 RASSF7Q02833 373 aa31.1■■■□□ 2.57
U2AF1-202ENST00000380276 GAS2L2Q8NHY3 880 aa31.1■■■□□ 2.57
U2AF1-202ENST00000380276 BCL2L12Q9HB09 334 aa31.1■■■□□ 2.57
U2AF1-202ENST00000380276 GNAT3A8MTJ3 354 aa31.09■■■□□ 2.57
U2AF1-202ENST00000380276 COL3A1P02461 1466 aaPredicted RBP31.08■■■□□ 2.57
U2AF1-202ENST00000380276 C2CD5Q86YS7 1000 aa31.08■■■□□ 2.57
U2AF1-202ENST00000380276 RBM46Q8TBY0 533 aaKnown RBP31.08■■■□□ 2.57
U2AF1-202ENST00000380276 A0A087WZG4 1122 aa31.07■■■□□ 2.56
U2AF1-202ENST00000380276 RRAGCQ9HB90 399 aa31.07■■■□□ 2.56
U2AF1-202ENST00000380276 NRXN2Q9P2S2 1712 aa31.07■■■□□ 2.56
U2AF1-202ENST00000380276 IL17REQ8NFR9 667 aa31.05■■■□□ 2.56
U2AF1-202ENST00000380276 ZNF496Q96IT1 587 aaPredicted RBP31.05■■■□□ 2.56
U2AF1-202ENST00000380276 SBF1O95248 1867 aa31.04■■■□□ 2.56
U2AF1-202ENST00000380276 ZNF790Q6PG37 636 aa31.04■■■□□ 2.56
U2AF1-202ENST00000380276 NPM2Q86SE8 214 aaKnown RBP31.04■■■□□ 2.56
U2AF1-202ENST00000380276 TTLL6Q8N841 843 aa31.04■■■□□ 2.56
U2AF1-202ENST00000380276 CARMIL3Q8ND23 1372 aa31.04■■■□□ 2.56
U2AF1-202ENST00000380276 HEG1Q9ULI3 1381 aa31.04■■■□□ 2.56
U2AF1-202ENST00000380276 DLEC1Q9Y238 1755 aa31.03■■■□□ 2.56
U2AF1-202ENST00000380276 H0YIN7 160 aa31.03■■■□□ 2.56
U2AF1-202ENST00000380276 EIF5P55010 431 aaKnown RBP31.03■■■□□ 2.56
U2AF1-202ENST00000380276 NPC1L1Q9UHC9 1359 aa31.03■■■□□ 2.56
U2AF1-202ENST00000380276 TEX13AQ9BXU3 409 aaPredicted RBP31.02■■■□□ 2.56
U2AF1-202ENST00000380276 TNRC6CQ9HCJ0 1690 aaKnown RBP31.02■■■□□ 2.56
U2AF1-202ENST00000380276 TBC1D9BQ66K14 1250 aa31.01■■■□□ 2.55
U2AF1-202ENST00000380276 CFAP53Q96M91 514 aa31.01■■■□□ 2.55
U2AF1-202ENST00000380276 TBC1D2BQ9UPU7 963 aa31.01■■■□□ 2.55
U2AF1-202ENST00000380276 WDR90Q96KV7 1748 aa31.01■■■□□ 2.55
U2AF1-202ENST00000380276 ZNF622Q969S3 477 aaKnown RBP eCLIP31■■■□□ 2.55
U2AF1-202ENST00000380276 FMNL2Q96PY5 1086 aa31■■■□□ 2.55
U2AF1-202ENST00000380276 NPHP1O15259 732 aa30.99■■■□□ 2.55
U2AF1-202ENST00000380276 LMNB1P20700 586 aa30.99■■■□□ 2.55
U2AF1-202ENST00000380276 FSTL1Q12841 308 aa30.99■■■□□ 2.55
U2AF1-202ENST00000380276 SIPA1L3O60292 1781 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-202ENST00000380276 SCN7AQ01118 1682 aa30.98■■■□□ 2.55
U2AF1-202ENST00000380276 PRKAR2BP31323 418 aa30.98■■■□□ 2.55
U2AF1-202ENST00000380276 HTRA3P83110 453 aa30.98■■■□□ 2.55
U2AF1-202ENST00000380276 CCDC24Q8N4L8 307 aa30.98■■■□□ 2.55
U2AF1-202ENST00000380276 ZNF219Q9P2Y4 722 aaPredicted RBP30.98■■■□□ 2.55
U2AF1-202ENST00000380276 BTBD11A6QL63 1104 aa30.96■■■□□ 2.55
U2AF1-202ENST00000380276 A1BGP04217 495 aa30.96■■■□□ 2.55
U2AF1-202ENST00000380276 DNAJC5GQ8N7S2 189 aa30.96■■■□□ 2.55
U2AF1-202ENST00000380276 IL6STP40189 918 aaPredicted RBP30.95■■■□□ 2.55
U2AF1-202ENST00000380276 ZC3H4Q9UPT8 1303 aaKnown RBP30.95■■■□□ 2.54
U2AF1-202ENST00000380276 TIAM2Q8IVF5 1701 aa30.94■■■□□ 2.54
U2AF1-202ENST00000380276 PHACTR3Q96KR7 559 aa30.94■■■□□ 2.54
U2AF1-202ENST00000380276 KCNQ3O43525 872 aa30.93■■■□□ 2.54
U2AF1-202ENST00000380276 PDE6BP35913 854 aa30.93■■■□□ 2.54
U2AF1-202ENST00000380276 NUDCQ9Y266 331 aa30.93■■■□□ 2.54
U2AF1-202ENST00000380276 PRELPP51888 382 aa30.92■■■□□ 2.54
U2AF1-202ENST00000380276 PRR5LQ6MZQ0 368 aa30.92■■■□□ 2.54
U2AF1-202ENST00000380276 SMC1BQ8NDV3 1235 aa30.92■■■□□ 2.54
U2AF1-202ENST00000380276 ANKRD31Q8N7Z5 1873 aa30.92■■■□□ 2.54
U2AF1-202ENST00000380276 NFKBIEO00221 500 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 SETDB2Q96T68 719 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 BRIP1Q9BX63 1249 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 RSPH6AQ9H0K4 717 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 CCDC88AQ3V6T2 1871 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 CEMIPQ8WUJ3 1361 aa30.91■■■□□ 2.54
U2AF1-202ENST00000380276 GLTPD2A6NH11 291 aa30.9■■■□□ 2.54
U2AF1-202ENST00000380276 C21orf2O43822 256 aa30.9■■■□□ 2.54
U2AF1-202ENST00000380276 U2AF1L5P0DN76 240 aaPredicted RBP30.9■■■□□ 2.54
U2AF1-202ENST00000380276 U2AF1Q01081 240 aaKnown RBP eCLIP30.9■■■□□ 2.54
U2AF1-202ENST00000380276 RTF1Q92541 710 aaKnown RBP30.9■■■□□ 2.54
U2AF1-202ENST00000380276 PDZRN3Q9UPQ7 1066 aa30.9■■■□□ 2.54
U2AF1-202ENST00000380276 PIP4K2AP48426 406 aaPredicted RBP30.89■■■□□ 2.54
U2AF1-202ENST00000380276 DZIP3Q86Y13 1208 aaKnown RBP30.89■■■□□ 2.54
U2AF1-202ENST00000380276 CNBD1Q8NA66 436 aa30.89■■■□□ 2.54
U2AF1-202ENST00000380276 COL11A2P13942 1736 aaPredicted RBP30.88■■■□□ 2.53
U2AF1-202ENST00000380276 VEGFAP15692 232 aaPredicted RBP30.88■■■□□ 2.53
U2AF1-202ENST00000380276 ST5P78524 1137 aa30.88■■■□□ 2.53
U2AF1-202ENST00000380276 KLRG1Q96E93 195 aa30.88■■■□□ 2.53
U2AF1-202ENST00000380276 CAMTA2O94983 1202 aa30.87■■■□□ 2.53
U2AF1-202ENST00000380276 MCM10Q7L590 875 aa30.86■■■□□ 2.53
U2AF1-202ENST00000380276 USP16Q9Y5T5 823 aa30.85■■■□□ 2.53
U2AF1-202ENST00000380276 DPY19L2Q6NUT2 758 aa30.84■■■□□ 2.53
U2AF1-202ENST00000380276 CACNA1SQ13698 1873 aa30.84■■■□□ 2.53
U2AF1-202ENST00000380276 BCORQ6W2J9 1755 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms