RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 TSPY26PQ9H489 355 aa10.57□□□□□ -0.72
TRIM6-203ENST00000380107 RGPD8O14715 1765 aaPredicted RBP10.56□□□□□ -0.72
TRIM6-203ENST00000380107 GNAT3A8MTJ3 354 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 MBD3O95983 291 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
TRIM6-203ENST00000380107 TECPR2O15040 1411 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 SRGAP3O43295 1099 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 ZNF500O60304 480 aaPredicted RBP10.56□□□□□ -0.72
TRIM6-203ENST00000380107 HDGFL1Q5TGJ6 251 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 FLT4P35916 1363 aa10.56□□□□□ -0.72
TRIM6-203ENST00000380107 ADAMTS13Q76LX8 1427 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 LARGE1O95461 756 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 PLCB2Q00722 1185 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 USP31Q70CQ4 1352 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 TMEM2Q9UHN6 1383 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 IGSF1Q8N6C5 1336 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 FIBPO43427 364 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 KCNQ3O43525 872 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 MCM2P49736 904 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 AK2P54819 239 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 TSC1Q92574 1164 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 STAP2Q9UGK3 403 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 AMOTL2Q9Y2J4 779 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
TRIM6-203ENST00000380107 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRIM6-203ENST00000380107 RPAP1Q9BWH6 1393 aaPredicted RBP10.55□□□□□ -0.72
TRIM6-203ENST00000380107 HSPA4P34932 840 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 HS1BP3Q53T59 392 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 PI4K2BQ8TCG2 481 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 RHPN1Q8TCX5 695 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 RBM33Q96EV2 1170 aaKnown RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 XRN1Q8IZH2 1706 aaKnown RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 FMN2Q9NZ56 1722 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 SBNO1A3KN83 1393 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 TNRQ92752 1358 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 HCLS1P14317 486 aaPredicted RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 ANAPC15P60006 121 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 COL9A3Q14050 684 aaPredicted RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 SIRT1Q96EB6 747 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 INTS4Q96HW7 963 aaKnown RBP10.54□□□□□ -0.72
TRIM6-203ENST00000380107 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
TRIM6-203ENST00000380107 KDRP35968 1356 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 TAF7Q15545 349 aaPredicted RBP10.53□□□□□ -0.72
TRIM6-203ENST00000380107 RUFY3Q7L099 469 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 TTC12Q9H892 705 aaPredicted RBP10.53□□□□□ -0.72
TRIM6-203ENST00000380107 LGR6Q9HBX8 967 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 CHPF2Q9P2E5 772 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 CHMP3Q9Y3E7 222 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 NALCNQ8IZF0 1738 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
TRIM6-203ENST00000380107 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 CASTP20810 708 aaKnown RBP10.53□□□□□ -0.72
TRIM6-203ENST00000380107 HOXC9P31274 260 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 SSH3Q8TE77 659 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 PDCL3Q9H2J4 239 aa10.53□□□□□ -0.72
TRIM6-203ENST00000380107 WDR33Q9C0J8 1336 aaKnown RBP10.53□□□□□ -0.72
TRIM6-203ENST00000380107 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 SGSM2O43147 1006 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 SYT1P21579 422 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.73
TRIM6-203ENST00000380107 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 DNTTIP2Q5QJE6 756 aaKnown RBP10.52□□□□□ -0.73
TRIM6-203ENST00000380107 CCDC83Q8IWF9 413 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
TRIM6-203ENST00000380107 AGLP35573 1532 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 SSH2Q76I76 1423 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 PTH1RQ03431 593 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 LSG1Q9H089 658 aaKnown RBP10.52□□□□□ -0.73
TRIM6-203ENST00000380107 RAD50Q92878 1312 aa10.52□□□□□ -0.73
TRIM6-203ENST00000380107 ABTB2Q8N961 1025 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 SYAP1Q96A49 352 aaPredicted RBP10.51□□□□□ -0.73
TRIM6-203ENST00000380107 TOPAZ1Q8N9V7 1692 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 MAP3K5Q99683 1374 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 STX6O43752 255 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 ZSCAN22P10073 491 aaPredicted RBP10.51□□□□□ -0.73
TRIM6-203ENST00000380107 NECAB1Q8N987 351 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 TCEANC2Q96MN5 208 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 TTC14Q96N46 770 aa10.51□□□□□ -0.73
TRIM6-203ENST00000380107 ADCY5O95622 1261 aa10.5□□□□□ -0.73
TRIM6-203ENST00000380107 DNM1Q05193 864 aaKnown RBP10.5□□□□□ -0.73
TRIM6-203ENST00000380107 PRPF40BQ6NWY9 871 aaKnown RBP10.5□□□□□ -0.73
TRIM6-203ENST00000380107 FAM173BQ6P4H8 233 aa10.5□□□□□ -0.73
TRIM6-203ENST00000380107 PKNOX2Q96KN3 472 aa10.5□□□□□ -0.73
TRIM6-203ENST00000380107 SMC3Q9UQE7 1217 aa10.5□□□□□ -0.73
TRIM6-203ENST00000380107 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.5□□□□□ -0.73
TRIM6-203ENST00000380107 CNTROBQ8N137 903 aa10.5□□□□□ -0.73
TRIM6-203ENST00000380107 JAKMIP1Q96N16 626 aaKnown RBP10.5□□□□□ -0.73
TRIM6-203ENST00000380107 VPS37CA5D8V6 355 aaPredicted RBP10.49□□□□□ -0.73
TRIM6-203ENST00000380107 GJB2P29033 226 aa10.49□□□□□ -0.73
TRIM6-203ENST00000380107 POLA2Q14181 598 aa10.49□□□□□ -0.73
TRIM6-203ENST00000380107 FERMT3Q86UX7 667 aa10.49□□□□□ -0.73
TRIM6-203ENST00000380107 KIF1BPQ96EK5 621 aa10.49□□□□□ -0.73
TRIM6-203ENST00000380107 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
TRIM6-203ENST00000380107 TTC21AQ8NDW8 1320 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms