RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 PPP1R42Q7Z4L9 355 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 CPA1P15085 419 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 KRT85P78386 507 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 NEXNQ0ZGT2 675 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 LIMCH1Q9UPQ0 1083 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 CEP152O94986 1710 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 SPDYE4A6NLX3 237 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 TOM1L2Q6ZVM7 507 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 ZHX1Q9UKY1 873 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-202ENST00000379826 ACEP12821 1306 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 TPM3P06753 285 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-202ENST00000379826 NECAB1Q8N987 351 aa13.54□□□□□ -0.24
SMAD9-202ENST00000379826 ANXA1P04083 346 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 DDX11Q96FC9 970 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 NEUROD6Q96NK8 337 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 ZSCAN22P10073 491 aaPredicted RBP13.53□□□□□ -0.24
SMAD9-202ENST00000379826 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
SMAD9-202ENST00000379826 CHMLP26374 656 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
SMAD9-202ENST00000379826 DYNC1I1O14576 645 aa13.52□□□□□ -0.24
SMAD9-202ENST00000379826 PPP4R3BQ5MIZ7 849 aa13.52□□□□□ -0.24
SMAD9-202ENST00000379826 BTBD11A6QL63 1104 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 MYL6BP14649 208 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 MCM5P33992 734 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
SMAD9-202ENST00000379826 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 NOLC1Q14978 699 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMAD9-202ENST00000379826 PDCL2Q8N4E4 241 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 CCDC8Q9H0W5 538 aaPredicted RBP13.52□□□□□ -0.25
SMAD9-202ENST00000379826 IQSEC2Q5JU85 1478 aa13.52□□□□□ -0.25
SMAD9-202ENST00000379826 RAB11FIP3O75154 756 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 NCBP3Q53F19 620 aaKnown RBP13.51□□□□□ -0.25
SMAD9-202ENST00000379826 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 PPP1R9BQ96SB3 815 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 TFIP11Q9UBB9 837 aaKnown RBP13.51□□□□□ -0.25
SMAD9-202ENST00000379826 DNM1Q05193 864 aaKnown RBP13.51□□□□□ -0.25
SMAD9-202ENST00000379826 AK2P54819 239 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 ATP8B2P98198 1209 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 TCEANC2Q96MN5 208 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 BOLA2Q9H3K6 86 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 PALD1Q9ULE6 856 aa13.51□□□□□ -0.25
SMAD9-202ENST00000379826 PPFIA3O75145 1194 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 TAF7LQ5H9L4 462 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 HOMER1Q86YM7 354 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
SMAD9-202ENST00000379826 NSFL1CQ9UNZ2 370 aaKnown RBP13.5□□□□□ -0.25
SMAD9-202ENST00000379826 NLRP1Q9C000 1473 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 PNMA6EA0A0J9YXQ4 647 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 UBE2HP62256 183 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 CREBRFQ8IUR6 639 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 KIF2CQ99661 725 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 C16orf45Q96MC5 204 aaPredicted RBP13.5□□□□□ -0.25
SMAD9-202ENST00000379826 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
SMAD9-202ENST00000379826 SMC2O95347 1197 aa13.49□□□□□ -0.25
SMAD9-202ENST00000379826 TTC21BQ7Z4L5 1316 aa13.49□□□□□ -0.25
SMAD9-202ENST00000379826 A0A0U1RQG5 324 aaPredicted RBP13.49□□□□□ -0.25
SMAD9-202ENST00000379826 HS1BP3Q53T59 392 aa13.49□□□□□ -0.25
SMAD9-202ENST00000379826 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
SMAD9-202ENST00000379826 CCAR2Q8N163 923 aaKnown RBP13.49□□□□□ -0.25
SMAD9-202ENST00000379826 PDCP20941 246 aa13.49□□□□□ -0.25
SMAD9-202ENST00000379826 TSC1Q92574 1164 aa13.49□□□□□ -0.25
SMAD9-202ENST00000379826 F13A1P00488 732 aa13.48□□□□□ -0.25
SMAD9-202ENST00000379826 GLRX3O76003 335 aaKnown RBP13.48□□□□□ -0.25
SMAD9-202ENST00000379826 SDF4Q9BRK5 362 aa13.48□□□□□ -0.25
SMAD9-202ENST00000379826 PHAXQ9H814 394 aaKnown RBP13.48□□□□□ -0.25
SMAD9-202ENST00000379826 HIP1O00291 1037 aa13.48□□□□□ -0.25
SMAD9-202ENST00000379826 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
SMAD9-202ENST00000379826 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 CADPS2Q86UW7 1296 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 DNAAF4Q8WXU2 420 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 PI4KAP2A4QPH2 592 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 UVSSAQ2YD98 709 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 PI4KAP1Q8N8J0 262 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 GLI2P10070 1586 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 RTL1A6NKG5 1358 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 FILIP1Q7Z7B0 1213 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 EFCAB6Q5THR3 1501 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 KINO60870 393 aaKnown RBP13.47□□□□□ -0.25
SMAD9-202ENST00000379826 ANAPC15P60006 121 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
SMAD9-202ENST00000379826 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
SMAD9-202ENST00000379826 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
SMAD9-202ENST00000379826 PA2G4Q9UQ80 394 aaKnown RBP13.46□□□□□ -0.25
SMAD9-202ENST00000379826 CPLX1O14810 134 aa13.46□□□□□ -0.26
SMAD9-202ENST00000379826 ME1P48163 572 aa13.46□□□□□ -0.26
SMAD9-202ENST00000379826 CLIP2Q9UDT6 1046 aa13.46□□□□□ -0.26
SMAD9-202ENST00000379826 MAP3K2Q9Y2U5 619 aa13.46□□□□□ -0.26
SMAD9-202ENST00000379826 CHL1O00533 1208 aa13.45□□□□□ -0.26
SMAD9-202ENST00000379826 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-202ENST00000379826 GUCY1B3Q02153 619 aa13.45□□□□□ -0.26
SMAD9-202ENST00000379826 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-202ENST00000379826 POLD1P28340 1107 aa13.45□□□□□ -0.26
SMAD9-202ENST00000379826 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms