RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 BAG3O95817 575 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
LINC00654-201ENST00000379053 TMEM57Q8N5G2 664 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
LINC00654-201ENST00000379053 LIG1P18858 919 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 MX1P20591 662 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 ARHGEF6Q15052 776 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 CCDC82Q8N4S0 544 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
LINC00654-201ENST00000379053 NAIPQ13075 1403 aa12.78□□□□□ -0.36
LINC00654-201ENST00000379053 CDK13Q14004 1512 aaKnown RBP12.77□□□□□ -0.37
LINC00654-201ENST00000379053 RAB34Q9BZG1 259 aa12.77□□□□□ -0.37
LINC00654-201ENST00000379053 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
LINC00654-201ENST00000379053 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
LINC00654-201ENST00000379053 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
LINC00654-201ENST00000379053 TRMT1LQ7Z2T5 733 aaKnown RBP12.77□□□□□ -0.37
LINC00654-201ENST00000379053 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
LINC00654-201ENST00000379053 SMARCC1Q92922 1105 aaPredicted RBP12.77□□□□□ -0.37
LINC00654-201ENST00000379053 MPHOSPH6Q99547 160 aaKnown RBP12.77□□□□□ -0.37
LINC00654-201ENST00000379053 F6X3S4 739 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 CBFA2T2O43439 604 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
LINC00654-201ENST00000379053 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 HDAC9Q9UKV0 1011 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 SLC12A7Q9Y666 1083 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 NPHP3Q7Z494 1330 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 ZNF213O14771 459 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 TRAK2O60296 914 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 TMEM266Q2M3C6 531 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
LINC00654-201ENST00000379053 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 K7ELQ4 463 aaPredicted RBP12.76□□□□□ -0.37
LINC00654-201ENST00000379053 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
LINC00654-201ENST00000379053 HSPA2P54652 639 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 SETDB2Q96T68 719 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 TNRQ92752 1358 aa12.76□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC194A0A1B0GVG4 234 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 DDB1Q16531 1140 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 DRC1Q96MC2 740 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 IFIT3O14879 490 aaKnown RBP12.75□□□□□ -0.37
LINC00654-201ENST00000379053 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 TTC21BQ7Z4L5 1316 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 MRE11P49959 708 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 CATIPQ7Z7H3 387 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
LINC00654-201ENST00000379053 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
LINC00654-201ENST00000379053 CETN2P41208 172 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 AXDND1Q5T1B0 1012 aaPredicted RBP12.74□□□□□ -0.37
LINC00654-201ENST00000379053 MAP3K2Q9Y2U5 619 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 SMARCA5O60264 1052 aaPredicted RBP12.74□□□□□ -0.37
LINC00654-201ENST00000379053 SNRPA1P09661 255 aaKnown RBP12.74□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC152Q4G0S7 254 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC150Q8NCX0 1101 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
LINC00654-201ENST00000379053 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 ACEP12821 1306 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 GOLGA6L10A6NI86 522 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 NLRP5P59047 1200 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 CA8P35219 290 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 TTF1Q15361 905 aaPredicted RBP12.74□□□□□ -0.37
LINC00654-201ENST00000379053 TSG101Q99816 390 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
LINC00654-201ENST00000379053 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
LINC00654-201ENST00000379053 PDE4BQ07343 736 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 UBE3BQ7Z3V4 1068 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 TSPY2A6NKD2 308 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 NFKBIBQ15653 356 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 SNRKQ9NRH2 765 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 UPF3BQ9BZI7 483 aaKnown RBP12.73□□□□□ -0.37
LINC00654-201ENST00000379053 SAMM50Q9Y512 469 aa12.73□□□□□ -0.37
LINC00654-201ENST00000379053 GSTO1P78417 241 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 ENOX2Q16206 610 aaKnown RBP12.72□□□□□ -0.37
LINC00654-201ENST00000379053 TAF4BQ92750 862 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 PHAXQ9H814 394 aaKnown RBP12.72□□□□□ -0.37
LINC00654-201ENST00000379053 F8W031 263 aaPredicted RBP12.72□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC191Q8NCU4 936 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 FLIIQ13045 1269 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 JAKMIP3Q5VZ66 844 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
LINC00654-201ENST00000379053 NLRP3Q96P20 1036 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 MAP7D2Q96T17 732 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 NUP62CLQ9H1M0 184 aa12.72□□□□□ -0.37
LINC00654-201ENST00000379053 CCDC12Q8WUD4 166 aaPredicted RBP12.71□□□□□ -0.37
LINC00654-201ENST00000379053 KAT14Q9H8E8 782 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 RXRBP28702 533 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 FERMT3Q86UX7 667 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 ZNF397Q8NF99 534 aaPredicted RBP12.71□□□□□ -0.37
LINC00654-201ENST00000379053 C8orf76Q96K31 380 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 GOLIM4O00461 696 aa12.71□□□□□ -0.37
LINC00654-201ENST00000379053 KIF5BP33176 963 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms