RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SOS1Q07889 1333 aaPredicted RBP24.22■■□□□ 1.47
PDLIM4-202ENST00000379018 TM4SF1P30408 202 aa24.22■■□□□ 1.47
PDLIM4-202ENST00000379018 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
PDLIM4-202ENST00000379018 COL15A1P39059 1388 aa24.2■■□□□ 1.46
PDLIM4-202ENST00000379018 NFIXQ14938 502 aa24.2■■□□□ 1.46
PDLIM4-202ENST00000379018 ZBTB1Q9Y2K1 713 aa24.2■■□□□ 1.46
PDLIM4-202ENST00000379018 TNRC6CQ9HCJ0 1690 aaKnown RBP24.2■■□□□ 1.46
PDLIM4-202ENST00000379018 RNMTO43148 476 aaKnown RBP24.19■■□□□ 1.46
PDLIM4-202ENST00000379018 CYP19A1P11511 503 aaPredicted RBP24.19■■□□□ 1.46
PDLIM4-202ENST00000379018 FSTL1Q12841 308 aa24.19■■□□□ 1.46
PDLIM4-202ENST00000379018 KLRG1Q96E93 195 aa24.19■■□□□ 1.46
PDLIM4-202ENST00000379018 CLSPNQ9HAW4 1339 aa24.17■■□□□ 1.46
PDLIM4-202ENST00000379018 BICDL1Q6ZP65 573 aa24.17■■□□□ 1.46
PDLIM4-202ENST00000379018 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
PDLIM4-202ENST00000379018 NARFQ9UHQ1 456 aa24.16■■□□□ 1.46
PDLIM4-202ENST00000379018 MRC1P22897 1456 aa24.15■■□□□ 1.46
PDLIM4-202ENST00000379018 SERPINB2P05120 415 aa24.15■■□□□ 1.46
PDLIM4-202ENST00000379018 C2CD5Q86YS7 1000 aa24.14■■□□□ 1.45
PDLIM4-202ENST00000379018 SMC1BQ8NDV3 1235 aa24.14■■□□□ 1.45
PDLIM4-202ENST00000379018 MTHFSDQ2M296 383 aaKnown RBP24.13■■□□□ 1.45
PDLIM4-202ENST00000379018 BCL2L12Q9HB09 334 aa24.13■■□□□ 1.45
PDLIM4-202ENST00000379018 ZNF330Q9Y3S2 320 aaPredicted RBP24.13■■□□□ 1.45
PDLIM4-202ENST00000379018 CARMIL3Q8ND23 1372 aa24.13■■□□□ 1.45
PDLIM4-202ENST00000379018 CCDC88AQ3V6T2 1871 aa24.13■■□□□ 1.45
PDLIM4-202ENST00000379018 LMNB1P20700 586 aa24.12■■□□□ 1.45
PDLIM4-202ENST00000379018 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
PDLIM4-202ENST00000379018 TTLL6Q8N841 843 aa24.12■■□□□ 1.45
PDLIM4-202ENST00000379018 TIAM2Q8IVF5 1701 aa24.12■■□□□ 1.45
PDLIM4-202ENST00000379018 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 NRXN2Q9P2S2 1712 aa24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 CAPN15O75808 1086 aa24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 PRELPP51888 382 aa24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 AMER1Q5JTC6 1135 aaPredicted RBP24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 COL13A1Q5TAT6 717 aaPredicted RBP24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 ZNF219Q9P2Y4 722 aaPredicted RBP24.11■■□□□ 1.45
PDLIM4-202ENST00000379018 TTC5Q8N0Z6 440 aa24.1■■□□□ 1.45
PDLIM4-202ENST00000379018 H0YIN7 160 aa24.09■■□□□ 1.45
PDLIM4-202ENST00000379018 CC2D1BQ5T0F9 858 aaKnown RBP24.09■■□□□ 1.45
PDLIM4-202ENST00000379018 CCDC24Q8N4L8 307 aa24.09■■□□□ 1.45
PDLIM4-202ENST00000379018 GLTPD2A6NH11 291 aa24.08■■□□□ 1.45
PDLIM4-202ENST00000379018 DIAPH1O60610 1272 aaKnown RBP24.08■■□□□ 1.45
PDLIM4-202ENST00000379018 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
PDLIM4-202ENST00000379018 ZNF622Q969S3 477 aaKnown RBP eCLIP24.08■■□□□ 1.45
PDLIM4-202ENST00000379018 ZC3H4Q9UPT8 1303 aaKnown RBP24.07■■□□□ 1.44
PDLIM4-202ENST00000379018 UBR2Q8IWV8 1755 aa24.06■■□□□ 1.44
PDLIM4-202ENST00000379018 STARD3NLO95772 234 aa24.06■■□□□ 1.44
PDLIM4-202ENST00000379018 VEGFAP15692 232 aaPredicted RBP24.06■■□□□ 1.44
PDLIM4-202ENST00000379018 NFKBIEO00221 500 aa24.05■■□□□ 1.44
PDLIM4-202ENST00000379018 TBC1D9BQ66K14 1250 aa24.05■■□□□ 1.44
PDLIM4-202ENST00000379018 VSIG10Q8N0Z9 540 aa24.05■■□□□ 1.44
PDLIM4-202ENST00000379018 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
PDLIM4-202ENST00000379018 KIF7Q2M1P5 1343 aa24.04■■□□□ 1.44
PDLIM4-202ENST00000379018 ANKRD31Q8N7Z5 1873 aa24.03■■□□□ 1.44
PDLIM4-202ENST00000379018 A0A087WZG4 1122 aa24.03■■□□□ 1.44
PDLIM4-202ENST00000379018 U2SURPO15042 1029 aaKnown RBP24.03■■□□□ 1.44
PDLIM4-202ENST00000379018 NPHP1O15259 732 aa24.03■■□□□ 1.44
PDLIM4-202ENST00000379018 TBC1D2BQ9UPU7 963 aa24.03■■□□□ 1.44
PDLIM4-202ENST00000379018 C21orf2O43822 256 aa24.02■■□□□ 1.44
PDLIM4-202ENST00000379018 EIF5P55010 431 aaKnown RBP24.02■■□□□ 1.44
PDLIM4-202ENST00000379018 TEFQ10587 303 aa24.02■■□□□ 1.44
PDLIM4-202ENST00000379018 TNS4Q8IZW8 715 aa24.02■■□□□ 1.44
PDLIM4-202ENST00000379018 ZNF496Q96IT1 587 aaPredicted RBP24.02■■□□□ 1.44
PDLIM4-202ENST00000379018 SCN7AQ01118 1682 aa24.01■■□□□ 1.43
PDLIM4-202ENST00000379018 COL11A2P13942 1736 aaPredicted RBP24.01■■□□□ 1.43
PDLIM4-202ENST00000379018 CACNA1SQ13698 1873 aa24■■□□□ 1.43
PDLIM4-202ENST00000379018 ERFEQ4G0M1 354 aa23.99■■□□□ 1.43
PDLIM4-202ENST00000379018 PRR5LQ6MZQ0 368 aa23.99■■□□□ 1.43
PDLIM4-202ENST00000379018 DPY19L2Q6NUT2 758 aa23.99■■□□□ 1.43
PDLIM4-202ENST00000379018 NPM2Q86SE8 214 aaKnown RBP23.99■■□□□ 1.43
PDLIM4-202ENST00000379018 HEG1Q9ULI3 1381 aa23.99■■□□□ 1.43
PDLIM4-202ENST00000379018 PDE6BP35913 854 aa23.98■■□□□ 1.43
PDLIM4-202ENST00000379018 ZNF790Q6PG37 636 aa23.98■■□□□ 1.43
PDLIM4-202ENST00000379018 PCNTO95613 3336 aa23.98■■□□□ 1.43
PDLIM4-202ENST00000379018 GNAT3A8MTJ3 354 aa23.97■■□□□ 1.43
PDLIM4-202ENST00000379018 HSPA1AP0DMV8 641 aaKnown RBP23.97■■□□□ 1.43
PDLIM4-202ENST00000379018 HSPA1BP0DMV9 641 aaKnown RBP23.97■■□□□ 1.43
PDLIM4-202ENST00000379018 A1BGP04217 495 aa23.96■■□□□ 1.43
PDLIM4-202ENST00000379018 IL17REQ8NFR9 667 aa23.96■■□□□ 1.43
PDLIM4-202ENST00000379018 GAS2L2Q8NHY3 880 aa23.96■■□□□ 1.43
PDLIM4-202ENST00000379018 BRIP1Q9BX63 1249 aa23.96■■□□□ 1.43
PDLIM4-202ENST00000379018 POTECB2RU33 542 aa23.95■■□□□ 1.42
PDLIM4-202ENST00000379018 CNBD1Q8NA66 436 aa23.95■■□□□ 1.42
PDLIM4-202ENST00000379018 FER1L6Q2WGJ9 1857 aa23.95■■□□□ 1.42
PDLIM4-202ENST00000379018 DICER1Q9UPY3 1922 aaKnown RBP23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 PIP4K2AP48426 406 aaPredicted RBP23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 SETDB2Q96T68 719 aa23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 TEX13AQ9BXU3 409 aaPredicted RBP23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 TAOK3Q9H2K8 898 aa23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
PDLIM4-202ENST00000379018 SIPA1L3O60292 1781 aaPredicted RBP23.93■■□□□ 1.42
PDLIM4-202ENST00000379018 IL6STP40189 918 aaPredicted RBP23.93■■□□□ 1.42
PDLIM4-202ENST00000379018 ST5P78524 1137 aa23.93■■□□□ 1.42
PDLIM4-202ENST00000379018 FMNL2Q96PY5 1086 aa23.93■■□□□ 1.42
PDLIM4-202ENST00000379018 SLX4Q8IY92 1834 aa23.93■■□□□ 1.42
PDLIM4-202ENST00000379018 PER1O15534 1290 aaPredicted RBP23.92■■□□□ 1.42
PDLIM4-202ENST00000379018 KCNQ3O43525 872 aa23.92■■□□□ 1.42
PDLIM4-202ENST00000379018 PDZRN3Q9UPQ7 1066 aa23.92■■□□□ 1.42
PDLIM4-202ENST00000379018 DDNO94850 711 aaPredicted RBP23.91■■□□□ 1.42
PDLIM4-202ENST00000379018 CAMTA2O94983 1202 aa23.91■■□□□ 1.42
PDLIM4-202ENST00000379018 POTEIP0CG38 1075 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms