RNA–Protein interactions for RNA: ENST00000378954.8

ATL2-201, Transcript of atlastin GTPase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATL2, Length 2,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-201ENST00000378954 USP35Q9P2H5 1018 aa16.62■□□□□ 0.25
ATL2-201ENST00000378954 COL5A2P05997 1499 aaPredicted RBP16.61■□□□□ 0.25
ATL2-201ENST00000378954 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
ATL2-201ENST00000378954 ABCC6O95255 1503 aa16.61■□□□□ 0.25
ATL2-201ENST00000378954 SCN11AQ9UI33 1791 aa16.61■□□□□ 0.25
ATL2-201ENST00000378954 CABP4P57796 275 aa16.61■□□□□ 0.25
ATL2-201ENST00000378954 KSR2Q6VAB6 950 aa16.61■□□□□ 0.25
ATL2-201ENST00000378954 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
ATL2-201ENST00000378954 CDC45O75419 566 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 BECN1Q14457 450 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 SDSP20132 328 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 ZCRB1Q8TBF4 217 aaKnown RBP16.6■□□□□ 0.25
ATL2-201ENST00000378954 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 HYPKQ9NX55 129 aa16.6■□□□□ 0.25
ATL2-201ENST00000378954 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
ATL2-201ENST00000378954 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
ATL2-201ENST00000378954 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
ATL2-201ENST00000378954 PDE1AP54750 535 aa16.59■□□□□ 0.25
ATL2-201ENST00000378954 EVA1CP58658 441 aa16.59■□□□□ 0.25
ATL2-201ENST00000378954 SSH3Q8TE77 659 aa16.59■□□□□ 0.25
ATL2-201ENST00000378954 IL1RAPL2Q9NP60 686 aa16.59■□□□□ 0.25
ATL2-201ENST00000378954 IBTKQ9P2D0 1353 aaPredicted RBP16.59■□□□□ 0.25
ATL2-201ENST00000378954 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.25
ATL2-201ENST00000378954 N4BP2Q86UW6 1770 aaPredicted RBP16.58■□□□□ 0.24
ATL2-201ENST00000378954 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
ATL2-201ENST00000378954 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.24
ATL2-201ENST00000378954 SURF6O75683 361 aaKnown RBP16.57■□□□□ 0.24
ATL2-201ENST00000378954 RBM25P49756 843 aaKnown RBP16.57■□□□□ 0.24
ATL2-201ENST00000378954 IL2RBP14784 551 aa16.57■□□□□ 0.24
ATL2-201ENST00000378954 COPS6Q7L5N1 327 aa16.57■□□□□ 0.24
ATL2-201ENST00000378954 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
ATL2-201ENST00000378954 PKD1L3Q7Z443 1732 aa16.57■□□□□ 0.24
ATL2-201ENST00000378954 C5P01031 1676 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
ATL2-201ENST00000378954 CARD10Q9BWT7 1032 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 PCDH11XQ9BZA7 1347 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 PCDH11YQ9BZA8 1340 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 POLA2Q14181 598 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 SALL3Q9BXA9 1300 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
ATL2-201ENST00000378954 MRC1P22897 1456 aa16.55■□□□□ 0.24
ATL2-201ENST00000378954 RTL5Q5HYW3 569 aaPredicted RBP16.55■□□□□ 0.24
ATL2-201ENST00000378954 DDX58O95786 925 aaKnown RBP16.55■□□□□ 0.24
ATL2-201ENST00000378954 MX1P20591 662 aa16.55■□□□□ 0.24
ATL2-201ENST00000378954 KIF2CQ99661 725 aa16.55■□□□□ 0.24
ATL2-201ENST00000378954 BTG4Q9NY30 223 aa16.55■□□□□ 0.24
ATL2-201ENST00000378954 ABCA3Q99758 1704 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 ALDH1L1O75891 902 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 IGKV5-2P06315 115 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 OSBPL3Q9H4L5 887 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 LRP10Q7Z4F1 713 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 NUTM1Q86Y26 1132 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 LINS1Q8NG48 757 aa16.54■□□□□ 0.24
ATL2-201ENST00000378954 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
ATL2-201ENST00000378954 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
ATL2-201ENST00000378954 RBM42Q9BTD8 480 aaKnown RBP16.53■□□□□ 0.24
ATL2-201ENST00000378954 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
ATL2-201ENST00000378954 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 PLEKHG2Q9H7P9 1386 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 GRM8O00222 908 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 MYD88Q99836 296 aa16.52■□□□□ 0.24
ATL2-201ENST00000378954 PA2G4Q9UQ80 394 aaKnown RBP16.52■□□□□ 0.24
ATL2-201ENST00000378954 JARID2Q92833 1246 aaPredicted RBP16.52■□□□□ 0.23
ATL2-201ENST00000378954 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
ATL2-201ENST00000378954 MYT1Q01538 1121 aa16.5■□□□□ 0.23
ATL2-201ENST00000378954 UNC5CLQ8IV45 518 aa16.5■□□□□ 0.23
ATL2-201ENST00000378954 CD2BP2O95400 341 aaKnown RBP16.5■□□□□ 0.23
ATL2-201ENST00000378954 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
ATL2-201ENST00000378954 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
ATL2-201ENST00000378954 PARP4Q9UKK3 1724 aaKnown RBP16.49■□□□□ 0.23
ATL2-201ENST00000378954 NEURL1BA8MQ27 555 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 NKX1-1Q15270 411 aaPredicted RBP16.49■□□□□ 0.23
ATL2-201ENST00000378954 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 TRIM6-TRIM34B2RNG4 842 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 ERVV-2B6SEH9 535 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
ATL2-201ENST00000378954 NBPF14Q5TI25 921 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
ATL2-201ENST00000378954 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
ATL2-201ENST00000378954 METTL22Q9BUU2 404 aaPredicted RBP16.49■□□□□ 0.23
ATL2-201ENST00000378954 ATP5J2-PTCD1G3V325 749 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 FRAT2O75474 233 aaPredicted RBP16.48■□□□□ 0.23
ATL2-201ENST00000378954 NEXNQ0ZGT2 675 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 MTX1Q13505 466 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 HSCBQ8IWL3 235 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 KIF1BPQ96EK5 621 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
ATL2-201ENST00000378954 A1BGP04217 495 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 STAP2Q9UGK3 403 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 GCKRQ14397 625 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 CASC1Q6TDU7 716 aa16.48■□□□□ 0.23
ATL2-201ENST00000378954 GLI3P10071 1580 aa16.47■□□□□ 0.23
ATL2-201ENST00000378954 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms