RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
NPHS1-202ENST00000378910 PDRG1Q9NUG6 133 aa13.8□□□□□ -0.2
NPHS1-202ENST00000378910 IL16Q14005 1332 aa13.8□□□□□ -0.2
NPHS1-202ENST00000378910 STK3Q13188 491 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
NPHS1-202ENST00000378910 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 CCDC83Q8IWF9 413 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 ZNF397Q8NF99 534 aaPredicted RBP13.79□□□□□ -0.2
NPHS1-202ENST00000378910 PPP1R12AO14974 1030 aaPredicted RBP13.79□□□□□ -0.2
NPHS1-202ENST00000378910 NEXNQ0ZGT2 675 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
NPHS1-202ENST00000378910 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 SPATS2LQ9NUQ6 558 aaKnown RBP13.79□□□□□ -0.2
NPHS1-202ENST00000378910 A0A1B0GUA9 196 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 SDSP20132 328 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 DCTN1Q14203 1278 aa13.79□□□□□ -0.2
NPHS1-202ENST00000378910 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
NPHS1-202ENST00000378910 ZNF330Q9Y3S2 320 aaPredicted RBP13.78□□□□□ -0.2
NPHS1-202ENST00000378910 KIAA0754O94854 1291 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 ZSCAN26Q16670 478 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
NPHS1-202ENST00000378910 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
NPHS1-202ENST00000378910 PDILTQ8N807 584 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 ATAD2Q6PL18 1390 aa13.78□□□□□ -0.2
NPHS1-202ENST00000378910 GOLGA6L10A6NI86 522 aa13.77□□□□□ -0.2
NPHS1-202ENST00000378910 RIOK3O14730 519 aaKnown RBP13.77□□□□□ -0.2
NPHS1-202ENST00000378910 NOC3LQ8WTT2 800 aaKnown RBP13.77□□□□□ -0.2
NPHS1-202ENST00000378910 ANTXR1Q9H6X2 564 aa13.77□□□□□ -0.2
NPHS1-202ENST00000378910 MYO6Q9UM54 1294 aa13.77□□□□□ -0.2
NPHS1-202ENST00000378910 NUP160Q12769 1436 aa13.77□□□□□ -0.2
NPHS1-202ENST00000378910 MYO1CO00159 1063 aa13.77□□□□□ -0.21
NPHS1-202ENST00000378910 TSR1Q2NL82 804 aaKnown RBP13.77□□□□□ -0.21
NPHS1-202ENST00000378910 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
NPHS1-202ENST00000378910 ANKRD1Q15327 319 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.76□□□□□ -0.21
NPHS1-202ENST00000378910 ZNF445P59923 1031 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 UBE2HP62256 183 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 LARP6Q9BRS8 491 aaKnown RBP13.76□□□□□ -0.21
NPHS1-202ENST00000378910 CARD14Q9BXL6 1004 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 HIP1O00291 1037 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 GIMAP6Q6P9H5 292 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 ANKRD18AQ8IVF6 992 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 RASSF8Q8NHQ8 419 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 ARHGAP45Q92619 1136 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 GTF3C6Q969F1 213 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 LIMCH1Q9UPQ0 1083 aa13.76□□□□□ -0.21
NPHS1-202ENST00000378910 STX6O43752 255 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
NPHS1-202ENST00000378910 GCKP35557 465 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 ME1P48163 572 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 TRIM29Q14134 588 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
NPHS1-202ENST00000378910 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 SLC24A3Q9HC58 644 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 SRGAP3O43295 1099 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 KIF18AQ8NI77 898 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
NPHS1-202ENST00000378910 HOOK1Q9UJC3 728 aaKnown RBP13.75□□□□□ -0.21
NPHS1-202ENST00000378910 SH3BP1Q9Y3L3 701 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 KIF14Q15058 1648 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 KIF3CO14782 793 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 HDGFL1Q5TGJ6 251 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 UBXN4Q92575 508 aa13.75□□□□□ -0.21
NPHS1-202ENST00000378910 STK38Q15208 465 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 CLIP2Q9UDT6 1046 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 C1orf141Q5JVX7 400 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 MCTP2Q6DN12 878 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 C16orf71Q8IYS4 520 aaPredicted RBP13.74□□□□□ -0.21
NPHS1-202ENST00000378910 NEK11Q8NG66 645 aa13.74□□□□□ -0.21
NPHS1-202ENST00000378910 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
NPHS1-202ENST00000378910 FAM177A1Q8N128 213 aaPredicted RBP13.74□□□□□ -0.21
NPHS1-202ENST00000378910 DDX54Q8TDD1 881 aaKnown RBP13.74□□□□□ -0.21
NPHS1-202ENST00000378910 SCAND2PQ9GZW5 306 aaPredicted RBP13.74□□□□□ -0.21
NPHS1-202ENST00000378910 F6X3S4 739 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 CCDC70Q6NSX1 233 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 SYT10Q6XYQ8 523 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 CFAP45Q9UL16 551 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
NPHS1-202ENST00000378910 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 PAXBP1Q9Y5B6 917 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
NPHS1-202ENST00000378910 MFSD4BQ5TF39 518 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
NPHS1-202ENST00000378910 TRMT1Q9NXH9 659 aaKnown RBP13.73□□□□□ -0.21
NPHS1-202ENST00000378910 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
NPHS1-202ENST00000378910 TRDNQ13061 729 aa13.72□□□□□ -0.21
NPHS1-202ENST00000378910 DHX8Q14562 1220 aaKnown RBP13.72□□□□□ -0.21
NPHS1-202ENST00000378910 NAA25Q14CX7 972 aa13.72□□□□□ -0.21
NPHS1-202ENST00000378910 MCM10Q7L590 875 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms