RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 RAD50Q92878 1312 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 CRB1P82279 1406 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 HTATSF1O43719 755 aaKnown RBP9.82□□□□□ -0.84
PTPRR-203ENST00000378778 CDC25BP30305 580 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 DHX8Q14562 1220 aaKnown RBP9.82□□□□□ -0.84
PTPRR-203ENST00000378778 FAM200AQ8TCP9 573 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 MEIS3Q99687 375 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 THUMPD2Q9BTF0 503 aaKnown RBP9.82□□□□□ -0.84
PTPRR-203ENST00000378778 ANO2Q9NQ90 1003 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 TTC21BQ7Z4L5 1316 aa9.82□□□□□ -0.84
PTPRR-203ENST00000378778 LRRC37A3O60309 1634 aa9.81□□□□□ -0.84
PTPRR-203ENST00000378778 SMARCA5O60264 1052 aaPredicted RBP9.81□□□□□ -0.84
PTPRR-203ENST00000378778 GADD45BO75293 160 aaPredicted RBP9.81□□□□□ -0.84
PTPRR-203ENST00000378778 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
PTPRR-203ENST00000378778 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.81□□□□□ -0.84
PTPRR-203ENST00000378778 TTC14Q96N46 770 aa9.81□□□□□ -0.84
PTPRR-203ENST00000378778 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
PTPRR-203ENST00000378778 SMC3Q9UQE7 1217 aa9.81□□□□□ -0.84
PTPRR-203ENST00000378778 RICTORQ6R327 1708 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 HCLS1P14317 486 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 VASPP50552 380 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 BBXQ8WY36 941 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 KCNB2Q92953 911 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 STK26Q9P289 416 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 TUBB4AP04350 444 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 PDCP20941 246 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 USP42Q9H9J4 1324 aaKnown RBP9.8□□□□□ -0.84
PTPRR-203ENST00000378778 TECPR2O15040 1411 aa9.8□□□□□ -0.84
PTPRR-203ENST00000378778 KIF2AO00139 706 aaPredicted RBP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 HSP90AB4PQ58FF6 505 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 VPS53Q5VIR6 699 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 KCND1Q9NSA2 647 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 CCDC66A2RUB6 948 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 SYT1P21579 422 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 CBX1P83916 185 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 SAFB2Q14151 953 aaKnown RBP eCLIP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 ATP2B3Q16720 1220 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 SLFNL1Q499Z3 407 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 RBM43Q6ZSC3 357 aaKnown RBP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 DDX19AQ9NUU7 478 aaKnown RBP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 EMILIN1Q9Y6C2 1016 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 MORC2Q9Y6X9 1032 aaPredicted RBP9.79□□□□□ -0.84
PTPRR-203ENST00000378778 MAP3K5Q99683 1374 aa9.79□□□□□ -0.84
PTPRR-203ENST00000378778 FMN2Q9NZ56 1722 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 CPS1P31327 1500 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 KDM4FA0A1W2PPD8 638 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 SGSM2O43147 1006 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 WASLO00401 505 aaPredicted RBP9.78□□□□□ -0.84
PTPRR-203ENST00000378778 MAP3K11Q16584 847 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 CNTROBQ8N137 903 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
PTPRR-203ENST00000378778 DDX41Q9UJV9 622 aaKnown RBP9.78□□□□□ -0.84
PTPRR-203ENST00000378778 TTC41PQ6P2S7 1318 aa9.77□□□□□ -0.84
PTPRR-203ENST00000378778 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 MYCNP04198 464 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 TDRD7Q8NHU6 1098 aaKnown RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 SCAND2PQ9GZW5 306 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 KRT85P78386 507 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 FOXD4L5Q5VV16 416 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 CCDC30Q5VVM6 783 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 SSH3Q8TE77 659 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 FOXD4L4Q8WXT5 416 aaPredicted RBP9.77□□□□□ -0.85
PTPRR-203ENST00000378778 PRDM10Q9NQV6 1147 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 SNX14Q9Y5W7 946 aa9.77□□□□□ -0.85
PTPRR-203ENST00000378778 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
PTPRR-203ENST00000378778 NUP62CLQ9H1M0 184 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 USP31Q70CQ4 1352 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 NCBP1Q09161 790 aaKnown RBP9.76□□□□□ -0.85
PTPRR-203ENST00000378778 ANKRD1Q15327 319 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 SARM1Q6SZW1 724 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 PLA2G4DQ86XP0 818 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 RILPL2Q969X0 211 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 ZNF830Q96NB3 372 aaPredicted RBP9.76□□□□□ -0.85
PTPRR-203ENST00000378778 LSG1Q9H089 658 aaKnown RBP9.76□□□□□ -0.85
PTPRR-203ENST00000378778 PYCARDQ9ULZ3 195 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 MTMR6Q9Y217 621 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 CCDC61Q9Y6R9 512 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 OVOS2A0A0J9YW53 1432 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 OVOS2Q6IE36 1432 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 DIP2AQ14689 1571 aa9.76□□□□□ -0.85
PTPRR-203ENST00000378778 NPHP3Q7Z494 1330 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 A2ML1A8K2U0 1454 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 HIP1O00291 1037 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 ZNF397Q8NF99 534 aaPredicted RBP9.75□□□□□ -0.85
PTPRR-203ENST00000378778 HDAC5Q9UQL6 1122 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 AK2P54819 239 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 POLA2Q14181 598 aa9.75□□□□□ -0.85
PTPRR-203ENST00000378778 KIF1BPQ96EK5 621 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms