RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 AOX1Q06278 1338 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 PTGS1P23219 599 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 CDK12Q9NYV4 1490 aaPredicted RBP16.34■□□□□ 0.21
KIF3A-201ENST00000378735 TNNT1P13805 278 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
KIF3A-201ENST00000378735 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 STAP2Q9UGK3 403 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 APBB1O00213 710 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 NOL8Q76FK4 1167 aaKnown RBP16.34■□□□□ 0.21
KIF3A-201ENST00000378735 MEIS3Q99687 375 aa16.34■□□□□ 0.21
KIF3A-201ENST00000378735 PDIA4P13667 645 aaKnown RBP16.33■□□□□ 0.2
KIF3A-201ENST00000378735 SYT1P21579 422 aa16.33■□□□□ 0.2
KIF3A-201ENST00000378735 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
KIF3A-201ENST00000378735 NRXN3Q9Y4C0 1643 aa16.33■□□□□ 0.2
KIF3A-201ENST00000378735 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
KIF3A-201ENST00000378735 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.2
KIF3A-201ENST00000378735 IL13P35225 146 aa16.32■□□□□ 0.2
KIF3A-201ENST00000378735 IRX5P78411 483 aaPredicted RBP16.32■□□□□ 0.2
KIF3A-201ENST00000378735 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
KIF3A-201ENST00000378735 HMOX1P09601 288 aa16.32■□□□□ 0.2
KIF3A-201ENST00000378735 AEBP1Q8IUX7 1158 aa16.32■□□□□ 0.2
KIF3A-201ENST00000378735 TTC14Q96N46 770 aa16.32■□□□□ 0.2
KIF3A-201ENST00000378735 C3P01024 1663 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 TSPYL1Q9H0U9 437 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 FIBPO43427 364 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 C16orf45Q96MC5 204 aaPredicted RBP16.31■□□□□ 0.2
KIF3A-201ENST00000378735 LRRCC1Q9C099 1032 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
KIF3A-201ENST00000378735 KCNJ4P48050 445 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 ZSCAN25Q6NSZ9 544 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 PLA2G4DQ86XP0 818 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 CCDC171Q6TFL3 1326 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 MAP3K11Q16584 847 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 TULP2O00295 520 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 CDC25BP30305 580 aa16.3■□□□□ 0.2
KIF3A-201ENST00000378735 NEMFO60524 1076 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
KIF3A-201ENST00000378735 RNF20Q5VTR2 975 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 ATP7BP35670 1465 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
KIF3A-201ENST00000378735 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 ELP1O95163 1332 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 ZNF75DP51815 510 aa16.29■□□□□ 0.2
KIF3A-201ENST00000378735 TYRO3Q06418 890 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 AATKQ6ZMQ8 1374 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 RTF1Q92541 710 aaKnown RBP16.28■□□□□ 0.2
KIF3A-201ENST00000378735 TMEM2Q9UHN6 1383 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 RAD50Q92878 1312 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 CAVIN2O95810 425 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 CEP135Q66GS9 1140 aa16.28■□□□□ 0.2
KIF3A-201ENST00000378735 TDRD7Q8NHU6 1098 aaKnown RBP16.28■□□□□ 0.2
KIF3A-201ENST00000378735 CHL1O00533 1208 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 TPD52L1Q16890 204 aaPredicted RBP16.27■□□□□ 0.2
KIF3A-201ENST00000378735 KRT24Q2M2I5 525 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 ERO1AQ96HE7 468 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 NUP62CLQ9H1M0 184 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 TRIM6-TRIM34B2RNG4 842 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 GNAI2P04899 355 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
KIF3A-201ENST00000378735 TECPR2O15040 1411 aa16.27■□□□□ 0.19
KIF3A-201ENST00000378735 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.19
KIF3A-201ENST00000378735 DNM1Q05193 864 aaKnown RBP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 RBM43Q6ZSC3 357 aaKnown RBP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 SIRT1Q96EB6 747 aa16.26■□□□□ 0.19
KIF3A-201ENST00000378735 SLIT1O75093 1534 aa16.26■□□□□ 0.19
KIF3A-201ENST00000378735 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 RBM6P78332 1123 aaKnown RBP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 LRMPQ12912 555 aa16.26■□□□□ 0.19
KIF3A-201ENST00000378735 SAFB2Q14151 953 aaKnown RBP eCLIP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 DRC7Q8IY82 874 aa16.26■□□□□ 0.19
KIF3A-201ENST00000378735 ZSCAN31Q96LW9 406 aaPredicted RBP16.26■□□□□ 0.19
KIF3A-201ENST00000378735 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
KIF3A-201ENST00000378735 AK2P54819 239 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 KCND1Q9NSA2 647 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 KIF1BPQ96EK5 621 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
KIF3A-201ENST00000378735 TRIM5Q9C035 493 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 CPS1P31327 1500 aa16.25■□□□□ 0.19
KIF3A-201ENST00000378735 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
KIF3A-201ENST00000378735 DDX19AQ9NUU7 478 aaKnown RBP16.24■□□□□ 0.19
KIF3A-201ENST00000378735 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
KIF3A-201ENST00000378735 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
KIF3A-201ENST00000378735 NYAP1Q6ZVC0 841 aa16.24■□□□□ 0.19
KIF3A-201ENST00000378735 KRT85P78386 507 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 NAA30Q147X3 362 aaPredicted RBP16.23■□□□□ 0.19
KIF3A-201ENST00000378735 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 FAM83GA6ND36 823 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 ZBTB22O15209 634 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
KIF3A-201ENST00000378735 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 SGSM2O43147 1006 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 CACTINQ8WUQ7 758 aaKnown RBP16.23■□□□□ 0.19
KIF3A-201ENST00000378735 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
KIF3A-201ENST00000378735 GJB2P29033 226 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms