RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CHMLP26374 656 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 OAS2P29728 719 aaKnown RBP12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 CLCN6P51797 869 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 TMC6Q7Z403 805 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 STK31Q9BXU1 1019 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 HDAC5Q9UQL6 1122 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.43
ARHGEF39-201ENST00000378387 SFPQP23246 707 aaKnown RBP eCLIP12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 RNF20Q5VTR2 975 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 PDILTQ8N807 584 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 ZNF428Q96B54 188 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 KINO60870 393 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 CUL4AQ13619 759 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 AFAP1Q8N556 730 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 CYP46A1Q9Y6A2 500 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 SART3Q15020 963 aaKnown RBP12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 EPC1Q9H2F5 836 aa12.39□□□□□ -0.43
ARHGEF39-201ENST00000378387 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 ST5P78524 1137 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 ISM2Q6H9L7 571 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 BIN1O00499 593 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 HSP90B2PQ58FF3 399 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 FCHSD2O94868 740 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 GNAI2P04899 355 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 PNMA6AP0CW24 399 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 CYP2C19P33261 490 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 TTC6Q86TZ1 520 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
ARHGEF39-201ENST00000378387 VIRMAQ69YN4 1812 aaKnown RBP12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 LMOD3Q0VAK6 560 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 IL16Q14005 1332 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 RAD50Q92878 1312 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 RGS22Q8NE09 1264 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 SMARCE1Q969G3 411 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 VPS18Q9P253 973 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 SYCP1Q15431 976 aa12.37□□□□□ -0.43
ARHGEF39-201ENST00000378387 CASQ1P31415 396 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 KANK1Q14678 1352 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 ME1P48163 572 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 ANAPC15P60006 121 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 MCM10Q7L590 875 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 AOPEPQ8N6M6 819 aa12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 DDX19AQ9NUU7 478 aaKnown RBP12.36□□□□□ -0.43
ARHGEF39-201ENST00000378387 PATL2C9JE40 543 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 KIF2AO00139 706 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 SCAND2PQ9GZW5 306 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 ARFGAP3Q9NP61 516 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 E9PCH4 1651 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 PDCP20941 246 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 DHX16O60231 1041 aaKnown RBP12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 NEMFO60524 1076 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 NR1I2O75469 434 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 EVCP57679 992 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
ARHGEF39-201ENST00000378387 DHX37Q8IY37 1157 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 CCDC9Q9Y3X0 531 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 CLASP1Q7Z460 1538 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 MNAT1P51948 309 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 HSP90AA4PQ58FG1 418 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 CDC37L1Q7L3B6 337 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 ADAMTS12P58397 1594 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 EFCAB2Q5VUJ9 269 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 CNTROBQ8N137 903 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 NAT10Q9H0A0 1025 aaKnown RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 SIL1Q9H173 461 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 PLEKHA4Q9H4M7 779 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 MTMR6Q9Y217 621 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 ADGRL2O95490 1459 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
ARHGEF39-201ENST00000378387 LARGE1O95461 756 aa12.33□□□□□ -0.43
ARHGEF39-201ENST00000378387 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.43
ARHGEF39-201ENST00000378387 NUP160Q12769 1436 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 SERPINC1P01008 464 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 RUFY3Q7L099 469 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 CREBRFQ8IUR6 639 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 MICALL1Q8N3F8 863 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 EFCC1Q9HA90 598 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 LCMT1Q9UIC8 334 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 PRDM15P57071 1507 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
ARHGEF39-201ENST00000378387 GNG11P61952 73 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms