RNA–Protein interactions for RNA: ENST00000378371.6

ARHGEF16-201, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF16, Length 2,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-201ENST00000378371 CCDC183Q5T5S1 534 aa18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 UPF3BQ9BZI7 483 aaKnown RBP18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 CHD2O14647 1828 aaKnown RBP18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 FMN2Q9NZ56 1722 aa18.47■□□□□ 0.55
ARHGEF16-201ENST00000378371 HSPA4P34932 840 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 RILPL2Q969X0 211 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 RGPD8O14715 1765 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 PNMA6EA0A0J9YXQ4 647 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 TRIM6-TRIM34B2RNG4 842 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 UNC5CLQ8IV45 518 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 CCDC94Q9BW85 323 aaPredicted RBP18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
ARHGEF16-201ENST00000378371 GNAI3P08754 354 aa18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 HMGN5P82970 282 aaKnown RBP18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 PXDNLA1KZ92 1463 aa18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 NOLC1Q14978 699 aaKnown RBP eCLIP18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 IL25Q9H293 177 aa18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 SPTLC3Q9NUV7 552 aa18.45■□□□□ 0.54
ARHGEF16-201ENST00000378371 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 TSPYL4Q9UJ04 414 aa18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 TCHHQ07283 1943 aa18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 USP31Q70CQ4 1352 aa18.44■□□□□ 0.54
ARHGEF16-201ENST00000378371 ADCY5O95622 1261 aa18.43■□□□□ 0.54
ARHGEF16-201ENST00000378371 TTC21AQ8NDW8 1320 aa18.43■□□□□ 0.54
ARHGEF16-201ENST00000378371 CRYBG1Q9Y4K1 1723 aa18.43■□□□□ 0.54
ARHGEF16-201ENST00000378371 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 DNTTIP2Q5QJE6 756 aaKnown RBP18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 ZSCAN22P10073 491 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 UBE2HP62256 183 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 TTC14Q96N46 770 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 ZNF830Q96NB3 372 aaPredicted RBP18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 RAD50Q92878 1312 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 USP54Q70EL1 1684 aa18.42■□□□□ 0.54
ARHGEF16-201ENST00000378371 HCLS1P14317 486 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 HSP90AB2PQ58FF8 381 aa18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 FUCA2Q9BTY2 467 aa18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 MAP3K19Q56UN5 1328 aa18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 FLIIQ13045 1269 aa18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 TTC12Q9H892 705 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF16-201ENST00000378371 KDRP35968 1356 aa18.4■□□□□ 0.54
ARHGEF16-201ENST00000378371 KCNA6P17658 529 aa18.4■□□□□ 0.54
ARHGEF16-201ENST00000378371 MTHFSDQ2M296 383 aaKnown RBP18.4■□□□□ 0.54
ARHGEF16-201ENST00000378371 FOXO3O43524 673 aa18.39■□□□□ 0.54
ARHGEF16-201ENST00000378371 KDM4AO75164 1064 aa18.39■□□□□ 0.54
ARHGEF16-201ENST00000378371 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.54
ARHGEF16-201ENST00000378371 PIK3C2AO00443 1686 aa18.39■□□□□ 0.53
ARHGEF16-201ENST00000378371 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
ARHGEF16-201ENST00000378371 ARID3AQ99856 593 aa18.39■□□□□ 0.53
ARHGEF16-201ENST00000378371 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
ARHGEF16-201ENST00000378371 LRRFIP2Q9Y608 721 aaKnown RBP18.39■□□□□ 0.53
ARHGEF16-201ENST00000378371 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 SGSM2O43147 1006 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 MPNDQ8N594 471 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 JARID2Q92833 1246 aaPredicted RBP18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 CACNA1FO60840 1977 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 STX6O43752 255 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 F13A1P00488 732 aa18.38■□□□□ 0.53
ARHGEF16-201ENST00000378371 SYT1P21579 422 aa18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 AK2P54819 239 aa18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 PI4K2BQ8TCG2 481 aa18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 LSG1Q9H089 658 aaKnown RBP18.37■□□□□ 0.53
ARHGEF16-201ENST00000378371 UTP14CQ5TAP6 766 aaKnown RBP18.36■□□□□ 0.53
ARHGEF16-201ENST00000378371 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
ARHGEF16-201ENST00000378371 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.36■□□□□ 0.53
ARHGEF16-201ENST00000378371 TSC1Q92574 1164 aa18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 LIMCH1Q9UPQ0 1083 aa18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 KIF3AQ9Y496 699 aa18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
ARHGEF16-201ENST00000378371 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 DMTNQ08495 405 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 USP44Q9H0E7 712 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 IL1RAPL2Q9NP60 686 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 AP5Z1O43299 807 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 NUTM1Q86Y26 1132 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 RASEFQ8IZ41 740 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 KIAA1524Q8TCG1 905 aa18.34■□□□□ 0.53
ARHGEF16-201ENST00000378371 FIBPO43427 364 aa18.33■□□□□ 0.53
ARHGEF16-201ENST00000378371 POLA2Q14181 598 aa18.33■□□□□ 0.53
ARHGEF16-201ENST00000378371 NGDNQ8NEJ9 315 aaKnown RBP18.33■□□□□ 0.53
ARHGEF16-201ENST00000378371 KCNF1Q9H3M0 494 aa18.33■□□□□ 0.53
ARHGEF16-201ENST00000378371 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.53
ARHGEF16-201ENST00000378371 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.52
ARHGEF16-201ENST00000378371 SBNO1A3KN83 1393 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms