RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 WDR7Q9Y4E6 1490 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 CEP85Q6P2H3 762 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 FAM200AQ8TCP9 573 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
PCDH9-202ENST00000377865 RBSNQ9H1K0 784 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 MYOM2P54296 1465 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 ATP7AQ04656 1500 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 F13A1P00488 732 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 TUBB4AP04350 444 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 SFPQP23246 707 aaKnown RBP eCLIP10.3□□□□□ -0.76
PCDH9-202ENST00000377865 FLIIQ13045 1269 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 RAPGEF4Q8WZA2 1011 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 IQGAP3Q86VI3 1631 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
PCDH9-202ENST00000377865 TAF7Q15545 349 aaPredicted RBP10.3□□□□□ -0.76
PCDH9-202ENST00000377865 ANTXR1Q9H6X2 564 aa10.3□□□□□ -0.76
PCDH9-202ENST00000377865 A0A1W2PP64 1363 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 SART3Q15020 963 aaKnown RBP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 CEP135Q66GS9 1140 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 CCDC150Q8NCX0 1101 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 IBTKQ9P2D0 1353 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 PPFIBP1Q86W92 1011 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 GDPD2Q9HCC8 539 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 ABTB2Q8N961 1025 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 FMNL2Q96PY5 1086 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 ZNF500O60304 480 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 CDR1P51861 262 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
PCDH9-202ENST00000377865 CNPY2Q9Y2B0 182 aa10.29□□□□□ -0.76
PCDH9-202ENST00000377865 ZSCAN16Q9H4T2 348 aaPredicted RBP10.28□□□□□ -0.76
PCDH9-202ENST00000377865 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 CCDC158Q5M9N0 1113 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 C16orf45Q96MC5 204 aaPredicted RBP10.28□□□□□ -0.76
PCDH9-202ENST00000377865 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.28□□□□□ -0.76
PCDH9-202ENST00000377865 GBP3Q9H0R5 595 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 AOX1Q06278 1338 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 SOS1Q07889 1333 aaPredicted RBP10.28□□□□□ -0.76
PCDH9-202ENST00000377865 F6X3S4 739 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 EPB41L2O43491 1005 aaKnown RBP10.28□□□□□ -0.76
PCDH9-202ENST00000377865 KDM4AO75164 1064 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 ATP8B2P98198 1209 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 CAGE1Q8TC20 777 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 UNC13BO14795 1591 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 TTC39AQ5SRH9 613 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 ZSCAN25Q6NSZ9 544 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 LMBRD1Q9NUN5 540 aa10.28□□□□□ -0.76
PCDH9-202ENST00000377865 BTBD11A6QL63 1104 aa10.27□□□□□ -0.76
PCDH9-202ENST00000377865 BMS1Q14692 1282 aaKnown RBP10.27□□□□□ -0.76
PCDH9-202ENST00000377865 FEZ1Q99689 392 aa10.27□□□□□ -0.76
PCDH9-202ENST00000377865 ECHDC1Q9NTX5 307 aa10.27□□□□□ -0.76
PCDH9-202ENST00000377865 TBC1D2BQ9UPU7 963 aa10.27□□□□□ -0.76
PCDH9-202ENST00000377865 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 KRT222Q8N1A0 295 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 MEIS3Q99687 375 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 POTEB2H3BUK9 544 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 FERMT3Q86UX7 667 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 C8orf58Q8NAV2 365 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 MYRIPQ8NFW9 859 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 DNAAF4Q8WXU2 420 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.77
PCDH9-202ENST00000377865 TRIM35Q9UPQ4 493 aa10.27□□□□□ -0.77
PCDH9-202ENST00000377865 ERVK-7P63135 1459 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 ZNF530Q6P9A1 599 aaPredicted RBP10.26□□□□□ -0.77
PCDH9-202ENST00000377865 GIMAP6Q6P9H5 292 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 WASF1Q92558 559 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 CASQ1P31415 396 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.26□□□□□ -0.77
PCDH9-202ENST00000377865 RIMS2Q9UQ26 1411 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 ZNF165P49910 485 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 IQCEQ6IPM2 695 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 CKAP2LQ8IYA6 745 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 PIBF1Q8WXW3 757 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 MIS18AQ9NYP9 233 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 PPIP5K1Q6PFW1 1433 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 MSH6P52701 1360 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 SSH2Q76I76 1423 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 WAPLQ7Z5K2 1190 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 AMOTL1Q8IY63 956 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 NOL10Q9BSC4 688 aaKnown RBP10.26□□□□□ -0.77
PCDH9-202ENST00000377865 SIL1Q9H173 461 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 CDC42BPAQ5VT25 1732 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 LRRIQ1Q96JM4 1722 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 ATP10AO60312 1499 aa10.26□□□□□ -0.77
PCDH9-202ENST00000377865 TTC41PQ6P2S7 1318 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
PCDH9-202ENST00000377865 OGFRQ9NZT2 677 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 IDI1Q13907 227 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 C16orf71Q8IYS4 520 aaPredicted RBP10.25□□□□□ -0.77
PCDH9-202ENST00000377865 TXLNBQ8N3L3 684 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 MAGEC2Q9UBF1 373 aaPredicted RBP10.25□□□□□ -0.77
PCDH9-202ENST00000377865 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 RHPN1Q8TCX5 695 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 ZNF830Q96NB3 372 aaPredicted RBP10.25□□□□□ -0.77
PCDH9-202ENST00000377865 KIF1BO60333 1816 aa10.25□□□□□ -0.77
PCDH9-202ENST00000377865 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 ANO6Q4KMQ2 910 aa10.24□□□□□ -0.77
PCDH9-202ENST00000377865 POLKQ9UBT6 870 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms