RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
DDR1-225ENST00000376568 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
DDR1-225ENST00000376568 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
DDR1-225ENST00000376568 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
DDR1-225ENST00000376568 FSD1Q9BTV5 496 aa16.6■□□□□ 0.25
DDR1-225ENST00000376568 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
DDR1-225ENST00000376568 RXRBP28702 533 aa16.6■□□□□ 0.25
DDR1-225ENST00000376568 TMEM131LA2VDJ0 1609 aa16.59■□□□□ 0.25
DDR1-225ENST00000376568 NPC1L1Q9UHC9 1359 aa16.59■□□□□ 0.25
DDR1-225ENST00000376568 CEP126Q9P2H0 1117 aa16.59■□□□□ 0.25
DDR1-225ENST00000376568 RTCBQ9Y3I0 505 aaKnown RBP16.59■□□□□ 0.25
DDR1-225ENST00000376568 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
DDR1-225ENST00000376568 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
DDR1-225ENST00000376568 ATP7BP35670 1465 aa16.59■□□□□ 0.25
DDR1-225ENST00000376568 LDHAL6AQ6ZMR3 332 aa16.58■□□□□ 0.25
DDR1-225ENST00000376568 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
DDR1-225ENST00000376568 FOSBP53539 338 aa16.58■□□□□ 0.24
DDR1-225ENST00000376568 ANKIB1Q9P2G1 1089 aa16.58■□□□□ 0.24
DDR1-225ENST00000376568 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.24
DDR1-225ENST00000376568 BECN1Q14457 450 aa16.57■□□□□ 0.24
DDR1-225ENST00000376568 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
DDR1-225ENST00000376568 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
DDR1-225ENST00000376568 NDUFB9Q9Y6M9 179 aa16.57■□□□□ 0.24
DDR1-225ENST00000376568 IFIT5Q13325 482 aaKnown RBP16.57■□□□□ 0.24
DDR1-225ENST00000376568 SETDB2Q96T68 719 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 MYO5BQ9ULV0 1848 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 VWDEQ8N2E2 1590 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 C6orf229H3BNL8 230 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
DDR1-225ENST00000376568 SIK1P57059 783 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 KSR2Q6VAB6 950 aa16.56■□□□□ 0.24
DDR1-225ENST00000376568 KRT27Q7Z3Y8 459 aa16.55■□□□□ 0.24
DDR1-225ENST00000376568 SIGLEC1Q9BZZ2 1709 aa16.55■□□□□ 0.24
DDR1-225ENST00000376568 ADGRB1O14514 1584 aa16.55■□□□□ 0.24
DDR1-225ENST00000376568 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
DDR1-225ENST00000376568 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
DDR1-225ENST00000376568 DDX21Q9NR30 783 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDR1-225ENST00000376568 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
DDR1-225ENST00000376568 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
DDR1-225ENST00000376568 QRICH2Q9H0J4 1663 aa16.54■□□□□ 0.24
DDR1-225ENST00000376568 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
DDR1-225ENST00000376568 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
DDR1-225ENST00000376568 SYNE4Q8N205 404 aa16.53■□□□□ 0.24
DDR1-225ENST00000376568 GRM8O00222 908 aa16.53■□□□□ 0.24
DDR1-225ENST00000376568 SRP68Q9UHB9 627 aaKnown RBP16.53■□□□□ 0.24
DDR1-225ENST00000376568 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
DDR1-225ENST00000376568 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 MCCP23508 829 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 HSCBQ8IWL3 235 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.24
DDR1-225ENST00000376568 IGHMBP2P38935 993 aaKnown RBP16.52■□□□□ 0.24
DDR1-225ENST00000376568 TRAPPC3LQ5T215 181 aa16.52■□□□□ 0.24
DDR1-225ENST00000376568 OTUD7AQ8TE49 926 aaPredicted RBP16.52■□□□□ 0.24
DDR1-225ENST00000376568 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
DDR1-225ENST00000376568 IL16Q14005 1332 aa16.52■□□□□ 0.23
DDR1-225ENST00000376568 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.23
DDR1-225ENST00000376568 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
DDR1-225ENST00000376568 SMARCC1Q92922 1105 aaPredicted RBP16.51■□□□□ 0.23
DDR1-225ENST00000376568 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
DDR1-225ENST00000376568 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
DDR1-225ENST00000376568 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
DDR1-225ENST00000376568 AATKQ6ZMQ8 1374 aa16.51■□□□□ 0.23
DDR1-225ENST00000376568 HTATSF1O43719 755 aaKnown RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 BICC1Q9H694 974 aaKnown RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 NSFL1CQ9UNZ2 370 aaKnown RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 TIMM10P62072 90 aa16.5■□□□□ 0.23
DDR1-225ENST00000376568 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 IRS4O14654 1257 aaPredicted RBP16.5■□□□□ 0.23
DDR1-225ENST00000376568 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
DDR1-225ENST00000376568 PNMA6EA0A0J9YXQ4 647 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
DDR1-225ENST00000376568 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 TAF5LO75529 589 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
DDR1-225ENST00000376568 DTNBO60941 627 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 USPL1Q5W0Q7 1092 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 MARCH10Q8NA82 808 aaPredicted RBP16.49■□□□□ 0.23
DDR1-225ENST00000376568 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
DDR1-225ENST00000376568 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
DDR1-225ENST00000376568 EN1Q05925 392 aaPredicted RBP16.48■□□□□ 0.23
DDR1-225ENST00000376568 ANKARQ7Z5J8 1434 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
DDR1-225ENST00000376568 CRKLP46109 303 aaKnown RBP16.48■□□□□ 0.23
DDR1-225ENST00000376568 DEFB132Q7Z7B7 95 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
DDR1-225ENST00000376568 CCDC87Q9NVE4 849 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 RAI14Q9P0K7 980 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 DEPDC5O75140 1603 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 LINS1Q8NG48 757 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 C3P01024 1663 aa16.48■□□□□ 0.23
DDR1-225ENST00000376568 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
DDR1-225ENST00000376568 DDX46Q7L014 1031 aaKnown RBP16.47■□□□□ 0.23
DDR1-225ENST00000376568 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms