RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 SEPT12Q8IYM1 358 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 LGR6Q9HBX8 967 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 TNS2Q63HR2 1409 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
CCHCR1-201ENST00000376266 LMOD3Q0VAK6 560 aa18.58■□□□□ 0.57
CCHCR1-201ENST00000376266 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.57
CCHCR1-201ENST00000376266 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.57
CCHCR1-201ENST00000376266 SNX21Q969T3 373 aa18.58■□□□□ 0.57
CCHCR1-201ENST00000376266 RXRBP28702 533 aa18.58■□□□□ 0.56
CCHCR1-201ENST00000376266 MVPQ14764 893 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-201ENST00000376266 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
CCHCR1-201ENST00000376266 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-201ENST00000376266 FAM13BQ9NYF5 915 aa18.57■□□□□ 0.56
CCHCR1-201ENST00000376266 PRDM4Q9UKN5 801 aa18.57■□□□□ 0.56
CCHCR1-201ENST00000376266 TERF1P54274 439 aa18.56■□□□□ 0.56
CCHCR1-201ENST00000376266 MARCH10Q8NA82 808 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-201ENST00000376266 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
CCHCR1-201ENST00000376266 MAP7D2Q96T17 732 aa18.56■□□□□ 0.56
CCHCR1-201ENST00000376266 RNMTO43148 476 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-201ENST00000376266 R3HCC1Q9Y3T6 440 aaKnown RBP18.55■□□□□ 0.56
CCHCR1-201ENST00000376266 KDM6AO15550 1401 aaPredicted RBP18.55■□□□□ 0.56
CCHCR1-201ENST00000376266 RBM25P49756 843 aaKnown RBP18.54■□□□□ 0.56
CCHCR1-201ENST00000376266 DCAF5Q96JK2 942 aa18.54■□□□□ 0.56
CCHCR1-201ENST00000376266 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
CCHCR1-201ENST00000376266 NKX1-1Q15270 411 aaPredicted RBP18.54■□□□□ 0.56
CCHCR1-201ENST00000376266 FAM182BQ5T319 152 aa18.54■□□□□ 0.56
CCHCR1-201ENST00000376266 GOLGA6L22H0YM25 854 aa18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 ZKSCAN2Q63HK3 967 aa18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 DZIP1LQ8IYY4 767 aaKnown RBP18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 CEMIPQ8WUJ3 1361 aa18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 EP400Q96L91 3159 aa18.53■□□□□ 0.56
CCHCR1-201ENST00000376266 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
CCHCR1-201ENST00000376266 DDX49Q9Y6V7 483 aaKnown RBP18.51■□□□□ 0.55
CCHCR1-201ENST00000376266 TEFQ10587 303 aa18.51■□□□□ 0.55
CCHCR1-201ENST00000376266 HDAC1Q13547 482 aaPredicted RBP18.5■□□□□ 0.55
CCHCR1-201ENST00000376266 NFATC2IPQ8NCF5 419 aa18.5■□□□□ 0.55
CCHCR1-201ENST00000376266 SCN11AQ9UI33 1791 aa18.49■□□□□ 0.55
CCHCR1-201ENST00000376266 RGS12O14924 1447 aa18.49■□□□□ 0.55
CCHCR1-201ENST00000376266 SLC52A2Q9HAB3 445 aa18.49■□□□□ 0.55
CCHCR1-201ENST00000376266 ADAMTS7Q9UKP4 1686 aa18.49■□□□□ 0.55
CCHCR1-201ENST00000376266 SSFA2P28290 1259 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 CABP4P57796 275 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 KLHL40Q2TBA0 621 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 KRT27Q7Z3Y8 459 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 ACSBG1Q96GR2 724 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 BRWD3Q6RI45 1802 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 TAF7Q15545 349 aaPredicted RBP18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 SYTL4Q96C24 671 aaPredicted RBP18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 IL16Q14005 1332 aa18.48■□□□□ 0.55
CCHCR1-201ENST00000376266 ERVV-2B6SEH9 535 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 TOGARAM1Q9Y4F4 1720 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 UQCRHLA0A096LP55 91 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 UQCRHP07919 91 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
CCHCR1-201ENST00000376266 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 GNAI1P63096 354 aa18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 HS1BP3Q53T59 392 aa18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 ITPRIPQ8IWB1 547 aa18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 IBTKQ9P2D0 1353 aaPredicted RBP18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 K7ELQ4 463 aaPredicted RBP18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 MBIPQ9NS73 344 aa18.46■□□□□ 0.55
CCHCR1-201ENST00000376266 CHL1O00533 1208 aa18.45■□□□□ 0.54
CCHCR1-201ENST00000376266 DDX19BQ9UMR2 479 aa18.45■□□□□ 0.54
CCHCR1-201ENST00000376266 NOL7Q9UMY1 257 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-201ENST00000376266 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
CCHCR1-201ENST00000376266 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
CCHCR1-201ENST00000376266 KCNQ2O43526 872 aa18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 CD2BP2O95400 341 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 NCLP19338 710 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 ARID3AQ99856 593 aa18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 ZNF500O60304 480 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-201ENST00000376266 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 PIGBQ92521 554 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 SMC4Q9NTJ3 1288 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 MRC1P22897 1456 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 DOT1LQ8TEK3 1739 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 KCNQ3O43525 872 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 MTERF4Q7Z6M4 381 aaKnown RBP18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 KIF2CQ99661 725 aa18.43■□□□□ 0.54
CCHCR1-201ENST00000376266 SMAP1Q8IYB5 467 aaPredicted RBP18.42■□□□□ 0.54
CCHCR1-201ENST00000376266 LNPKQ9C0E8 428 aa18.42■□□□□ 0.54
CCHCR1-201ENST00000376266 ZNF445P59923 1031 aa18.42■□□□□ 0.54
CCHCR1-201ENST00000376266 PTF1AQ7RTS3 328 aa18.42■□□□□ 0.54
CCHCR1-201ENST00000376266 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
CCHCR1-201ENST00000376266 TRIM27P14373 513 aa18.41■□□□□ 0.54
CCHCR1-201ENST00000376266 CLEC17AQ6ZS10 378 aa18.41■□□□□ 0.54
CCHCR1-201ENST00000376266 CAVIN1Q6NZI2 390 aaKnown RBP18.41■□□□□ 0.54
CCHCR1-201ENST00000376266 ITGB4P16144 1822 aa18.41■□□□□ 0.54
CCHCR1-201ENST00000376266 DYNC1I1O14576 645 aa18.4■□□□□ 0.54
CCHCR1-201ENST00000376266 BCL9O00512 1426 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms