RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 PPP1R42Q7Z4L9 355 aa23.16■■□□□ 1.3
PPP1R3F-202ENST00000376188 TNS3Q68CZ2 1445 aa23.16■■□□□ 1.3
PPP1R3F-202ENST00000376188 AK9Q5TCS8 1911 aa23.15■■□□□ 1.3
PPP1R3F-202ENST00000376188 NLRP2Q9NX02 1062 aa23.14■■□□□ 1.29
PPP1R3F-202ENST00000376188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPP1R3F-202ENST00000376188 ALDH1L1O75891 902 aa23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 ANXA1P04083 346 aa23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 HYPKQ9NX55 129 aa23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 TATP17735 454 aaPredicted RBP23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
PPP1R3F-202ENST00000376188 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
PPP1R3F-202ENST00000376188 KSR2Q6VAB6 950 aa23.12■■□□□ 1.29
PPP1R3F-202ENST00000376188 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
PPP1R3F-202ENST00000376188 DDX11L8A8MPP1 907 aa23.12■■□□□ 1.29
PPP1R3F-202ENST00000376188 SURF6O75683 361 aaKnown RBP23.12■■□□□ 1.29
PPP1R3F-202ENST00000376188 HSP90AB4PQ58FF6 505 aa23.11■■□□□ 1.29
PPP1R3F-202ENST00000376188 TSHZ3Q63HK5 1081 aa23.11■■□□□ 1.29
PPP1R3F-202ENST00000376188 RAB3GAP1Q15042 981 aa23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 KIF1BPQ96EK5 621 aa23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 MAP3K2Q9Y2U5 619 aa23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 PKD1L3Q7Z443 1732 aa23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 MEGF6O75095 1541 aa23.1■■□□□ 1.29
PPP1R3F-202ENST00000376188 C5P01031 1676 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 ST18O60284 1047 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 MTX1Q13505 466 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 RHPN1Q8TCX5 695 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 SLC52A2Q9HAB3 445 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 DDX58O95786 925 aaKnown RBP23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 PHKG2P15735 406 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 ESYT1Q9BSJ8 1104 aa23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 DDX21Q9NR30 783 aaKnown RBP eCLIP23.09■■□□□ 1.29
PPP1R3F-202ENST00000376188 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.29
PPP1R3F-202ENST00000376188 TRIM6-TRIM34B2RNG4 842 aa23.08■■□□□ 1.29
PPP1R3F-202ENST00000376188 PROSER3Q2NL68 480 aa23.08■■□□□ 1.29
PPP1R3F-202ENST00000376188 ZNF790Q6PG37 636 aa23.08■■□□□ 1.29
PPP1R3F-202ENST00000376188 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.29
PPP1R3F-202ENST00000376188 CSB-PGBD3P0DP91 1061 aa23.08■■□□□ 1.28
PPP1R3F-202ENST00000376188 GBP4Q96PP9 640 aa23.08■■□□□ 1.28
PPP1R3F-202ENST00000376188 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.28
PPP1R3F-202ENST00000376188 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 TNPO1Q92973 898 aaKnown RBP23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 C9orf78Q9NZ63 289 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 CPDO75976 1380 aa23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 MRC1P22897 1456 aa23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 CHMLP26374 656 aa23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 RILPL2Q969X0 211 aa23.07■■□□□ 1.28
PPP1R3F-202ENST00000376188 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
PPP1R3F-202ENST00000376188 MCCP23508 829 aa23.05■■□□□ 1.28
PPP1R3F-202ENST00000376188 LINS1Q8NG48 757 aa23.05■■□□□ 1.28
PPP1R3F-202ENST00000376188 CABLES1Q8TDN4 633 aa23.04■■□□□ 1.28
PPP1R3F-202ENST00000376188 EPB41L2O43491 1005 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 PTMSP20962 102 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 NUTM1Q86Y26 1132 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 FOXD4L1Q9NU39 408 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 PARP4Q9UKK3 1724 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 TRAK2O60296 914 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 DCAF5Q96JK2 942 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 DNAJC5Q9H3Z4 198 aa23.03■■□□□ 1.28
PPP1R3F-202ENST00000376188 ANAPC15P60006 121 aa23.02■■□□□ 1.28
PPP1R3F-202ENST00000376188 PDIA6Q15084 440 aa23.02■■□□□ 1.28
PPP1R3F-202ENST00000376188 UTYO14607 1347 aa23.01■■□□□ 1.27
PPP1R3F-202ENST00000376188 NFATC2IPQ8NCF5 419 aa23.01■■□□□ 1.27
PPP1R3F-202ENST00000376188 PI4K2BQ8TCG2 481 aa23.01■■□□□ 1.27
PPP1R3F-202ENST00000376188 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
PPP1R3F-202ENST00000376188 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
PPP1R3F-202ENST00000376188 USP42Q9H9J4 1324 aaKnown RBP23■■□□□ 1.27
PPP1R3F-202ENST00000376188 GRM8O00222 908 aa23■■□□□ 1.27
PPP1R3F-202ENST00000376188 OS9Q13438 667 aaPredicted RBP23■■□□□ 1.27
PPP1R3F-202ENST00000376188 CWF19L2Q2TBE0 894 aaKnown RBP23■■□□□ 1.27
PPP1R3F-202ENST00000376188 ERC1Q8IUD2 1116 aa23■■□□□ 1.27
PPP1R3F-202ENST00000376188 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
PPP1R3F-202ENST00000376188 TTC41PQ6P2S7 1318 aa23■■□□□ 1.27
PPP1R3F-202ENST00000376188 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
PPP1R3F-202ENST00000376188 ANO2Q9NQ90 1003 aa22.99■■□□□ 1.27
PPP1R3F-202ENST00000376188 HSPA2P54652 639 aa22.99■■□□□ 1.27
PPP1R3F-202ENST00000376188 L1TD1Q5T7N2 865 aaKnown RBP22.99■■□□□ 1.27
PPP1R3F-202ENST00000376188 LARP1Q6PKG0 1096 aaKnown RBP22.99■■□□□ 1.27
PPP1R3F-202ENST00000376188 CLEC17AQ6ZS10 378 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 CNTROBQ8N137 903 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 CLASRPQ8N2M8 674 aaKnown RBP22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 LAMB4A4D0S4 1761 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 CYP27B1O15528 508 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 MCM2P49736 904 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 NUCB2P80303 420 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 AIMP1Q12904 312 aaKnown RBP22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 IL17RAQ96F46 866 aa22.98■■□□□ 1.27
PPP1R3F-202ENST00000376188 NEXNQ0ZGT2 675 aa22.97■■□□□ 1.27
PPP1R3F-202ENST00000376188 RIC3Q7Z5B4 369 aa22.97■■□□□ 1.27
PPP1R3F-202ENST00000376188 IL27Q8NEV9 243 aa22.97■■□□□ 1.27
PPP1R3F-202ENST00000376188 ZNF496Q96IT1 587 aaPredicted RBP22.97■■□□□ 1.27
PPP1R3F-202ENST00000376188 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
PPP1R3F-202ENST00000376188 GLRX3O76003 335 aaKnown RBP22.96■■□□□ 1.27
PPP1R3F-202ENST00000376188 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
PPP1R3F-202ENST00000376188 SKOR2Q2VWA4 1001 aaPredicted RBP22.95■■□□□ 1.26
PPP1R3F-202ENST00000376188 FMNL2Q96PY5 1086 aa22.95■■□□□ 1.26
PPP1R3F-202ENST00000376188 SSFA2P28290 1259 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms