RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
MSH5-202ENST00000375740 DCCP43146 1447 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
MSH5-202ENST00000375740 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 CASC1Q6TDU7 716 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 RAPGEF4Q8WZA2 1011 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 CD2BP2O95400 341 aaKnown RBP17.16■□□□□ 0.34
MSH5-202ENST00000375740 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
MSH5-202ENST00000375740 SSH3Q8TE77 659 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 HEG1Q9ULI3 1381 aa17.16■□□□□ 0.34
MSH5-202ENST00000375740 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
MSH5-202ENST00000375740 NPHP3Q7Z494 1330 aa17.15■□□□□ 0.34
MSH5-202ENST00000375740 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
MSH5-202ENST00000375740 GRPEL1Q9HAV7 217 aa17.15■□□□□ 0.34
MSH5-202ENST00000375740 ADCY9O60503 1353 aa17.15■□□□□ 0.34
MSH5-202ENST00000375740 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.34
MSH5-202ENST00000375740 MRE11P49959 708 aa17.14■□□□□ 0.34
MSH5-202ENST00000375740 PROSER3Q2NL68 480 aa17.14■□□□□ 0.34
MSH5-202ENST00000375740 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
MSH5-202ENST00000375740 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
MSH5-202ENST00000375740 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
MSH5-202ENST00000375740 MX1P20591 662 aa17.14■□□□□ 0.33
MSH5-202ENST00000375740 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
MSH5-202ENST00000375740 POLA2Q14181 598 aa17.13■□□□□ 0.33
MSH5-202ENST00000375740 COL18A1P39060 1754 aa17.13■□□□□ 0.33
MSH5-202ENST00000375740 DDIT3P35638 169 aa17.13■□□□□ 0.33
MSH5-202ENST00000375740 ADAMTS7Q9UKP4 1686 aa17.12■□□□□ 0.33
MSH5-202ENST00000375740 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
MSH5-202ENST00000375740 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
MSH5-202ENST00000375740 SRGAP3O43295 1099 aa17.12■□□□□ 0.33
MSH5-202ENST00000375740 IL1RAPL2Q9NP60 686 aa17.12■□□□□ 0.33
MSH5-202ENST00000375740 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
MSH5-202ENST00000375740 TNS3Q68CZ2 1445 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 K7ELQ4 463 aaPredicted RBP17.11■□□□□ 0.33
MSH5-202ENST00000375740 PHKG2P15735 406 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 SLC39A6Q13433 755 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 GAS2L3Q86XJ1 694 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 ERC2O15083 957 aa17.11■□□□□ 0.33
MSH5-202ENST00000375740 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 SLC52A2Q9HAB3 445 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 REC8O95072 547 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 RABEP1Q15276 862 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
MSH5-202ENST00000375740 CRYBG1Q9Y4K1 1723 aa17.09■□□□□ 0.33
MSH5-202ENST00000375740 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
MSH5-202ENST00000375740 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.333e-7■■□□□ 13.8
MSH5-202ENST00000375740 MEGF6O75095 1541 aa17.09■□□□□ 0.33
MSH5-202ENST00000375740 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
MSH5-202ENST00000375740 IFNL2Q8IZJ0 200 aa17.09■□□□□ 0.33
MSH5-202ENST00000375740 FOXD4L1Q9NU39 408 aa17.09■□□□□ 0.33
MSH5-202ENST00000375740 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.33
MSH5-202ENST00000375740 ALDH1L1O75891 902 aa17.08■□□□□ 0.33
MSH5-202ENST00000375740 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.33
MSH5-202ENST00000375740 RILPL2Q969X0 211 aa17.08■□□□□ 0.33
MSH5-202ENST00000375740 DDX21Q9NR30 783 aaKnown RBP eCLIP17.08■□□□□ 0.33
MSH5-202ENST00000375740 TUBGCP6Q96RT7 1819 aa17.08■□□□□ 0.32
MSH5-202ENST00000375740 TRIM6-TRIM34B2RNG4 842 aa17.08■□□□□ 0.32
MSH5-202ENST00000375740 PDIA6Q15084 440 aa17.08■□□□□ 0.32
MSH5-202ENST00000375740 C9orf78Q9NZ63 289 aaPredicted RBP17.08■□□□□ 0.32
MSH5-202ENST00000375740 AIMP1Q12904 312 aaKnown RBP17.07■□□□□ 0.32
MSH5-202ENST00000375740 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
MSH5-202ENST00000375740 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
MSH5-202ENST00000375740 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
MSH5-202ENST00000375740 KIF1BPQ96EK5 621 aa17.06■□□□□ 0.32
MSH5-202ENST00000375740 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
MSH5-202ENST00000375740 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
MSH5-202ENST00000375740 CYP27B1O15528 508 aa17.05■□□□□ 0.32
MSH5-202ENST00000375740 CHMLP26374 656 aa17.05■□□□□ 0.32
MSH5-202ENST00000375740 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
MSH5-202ENST00000375740 AOX1Q06278 1338 aa17.05■□□□□ 0.32
MSH5-202ENST00000375740 DDX58O95786 925 aaKnown RBP17.04■□□□□ 0.32
MSH5-202ENST00000375740 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
MSH5-202ENST00000375740 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 MTX1Q13505 466 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
MSH5-202ENST00000375740 CPDO75976 1380 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 MYL6BP14649 208 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
MSH5-202ENST00000375740 TNPO1Q92973 898 aaKnown RBP17.03■□□□□ 0.32
MSH5-202ENST00000375740 C5P01031 1676 aa17.03■□□□□ 0.32
MSH5-202ENST00000375740 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
MSH5-202ENST00000375740 RIC3Q7Z5B4 369 aa17.03■□□□□ 0.32
MSH5-202ENST00000375740 ABCC6O95255 1503 aa17.02■□□□□ 0.32
MSH5-202ENST00000375740 PDCL3Q9H2J4 239 aa17.02■□□□□ 0.32
MSH5-202ENST00000375740 USP16Q9Y5T5 823 aa17.02■□□□□ 0.32
MSH5-202ENST00000375740 MAP4K4O95819 1239 aaPredicted RBP17.02■□□□□ 0.31
MSH5-202ENST00000375740 OS9Q13438 667 aaPredicted RBP17.02■□□□□ 0.31
MSH5-202ENST00000375740 RAB3GAP1Q15042 981 aa17.02■□□□□ 0.31
MSH5-202ENST00000375740 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.31
MSH5-202ENST00000375740 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.31
MSH5-202ENST00000375740 GRM8O00222 908 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms