RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 EVI5LQ96CN4 794 aa11.81□□□□□ -0.52
PTCH1-204ENST00000375290 ZNF165P49910 485 aa11.81□□□□□ -0.52
PTCH1-204ENST00000375290 KCNG4Q8TDN1 519 aa11.81□□□□□ -0.52
PTCH1-204ENST00000375290 MRC2Q9UBG0 1479 aa11.81□□□□□ -0.52
PTCH1-204ENST00000375290 POTEJP0CG39 1038 aa11.81□□□□□ -0.52
PTCH1-204ENST00000375290 MAGI1Q96QZ7 1491 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-204ENST00000375290 HSPA4P34932 840 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
PTCH1-204ENST00000375290 CROCCP2Q86T23 111 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
PTCH1-204ENST00000375290 MAP2K1Q02750 393 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-204ENST00000375290 HDGFL1Q5TGJ6 251 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 UGGT2Q9NYU1 1516 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
PTCH1-204ENST00000375290 NUCB1Q02818 461 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 C6orf163Q5TEZ5 329 aa11.8□□□□□ -0.52
PTCH1-204ENST00000375290 AMPD3Q01432 767 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 JAKMIP1Q96N16 626 aaKnown RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 KIF4BQ2VIQ3 1234 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 NBPF8Q3BBV2 869 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 PPM1EQ8WY54 764 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 ZNF330Q9Y3S2 320 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 TCOF1Q13428 1488 aaKnown RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 EIF5P55010 431 aaKnown RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 IQCDQ96DY2 449 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 ELP1O95163 1332 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 CBX1P83916 185 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 PPP1R2P41236 205 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 ANKRD24Q8TF21 1146 aa11.79□□□□□ -0.52
PTCH1-204ENST00000375290 RNF41Q9H4P4 317 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-204ENST00000375290 CLUL1Q15846 466 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 POTEDQ86YR6 584 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 MKRN1Q9UHC7 482 aaKnown RBP11.78□□□□□ -0.52
PTCH1-204ENST00000375290 SRGAP3O43295 1099 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 CEP128Q6ZU80 1094 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 TMEM57Q8N5G2 664 aa11.78□□□□□ -0.52
PTCH1-204ENST00000375290 C16orf45Q96MC5 204 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-204ENST00000375290 LRRFIP2Q9Y608 721 aaKnown RBP11.78□□□□□ -0.52
PTCH1-204ENST00000375290 SSR1P43307 286 aaKnown RBP11.77□□□□□ -0.52
PTCH1-204ENST00000375290 B4GALNT4Q76KP1 1039 aa11.77□□□□□ -0.52
PTCH1-204ENST00000375290 RAD50Q92878 1312 aa11.77□□□□□ -0.52
PTCH1-204ENST00000375290 ZSCAN22P10073 491 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-204ENST00000375290 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-204ENST00000375290 TSG101Q99816 390 aa11.77□□□□□ -0.52
PTCH1-204ENST00000375290 RBM28Q9NW13 759 aaKnown RBP11.77□□□□□ -0.52
PTCH1-204ENST00000375290 IMPACTQ9P2X3 320 aa11.77□□□□□ -0.52
PTCH1-204ENST00000375290 ZFYVE9O95405 1425 aa11.77□□□□□ -0.52
PTCH1-204ENST00000375290 STAMBPO95630 424 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 STK11IPQ8N1F8 1099 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 A0A1B0GUA9 196 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 EBAG9O00559 213 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 NEFHP12036 1026 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 TTC22Q5TAA0 569 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 KDM5DQ9BY66 1539 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 ZNF445P59923 1031 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 CCDC12Q8WUD4 166 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-204ENST00000375290 XPCQ01831 940 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-204ENST00000375290 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
PTCH1-204ENST00000375290 URI1O94763 535 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-204ENST00000375290 CTDP1Q9Y5B0 961 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-204ENST00000375290 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 GTF2A1P52655 376 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-204ENST00000375290 GCC2Q8IWJ2 1684 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 RPGRIP1Q96KN7 1286 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
PTCH1-204ENST00000375290 ABCC5O15440 1437 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-204ENST00000375290 RTEL1-TNFRSF6BF6WH68 1400 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 MNAT1P51948 309 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 USH1CQ9Y6N9 552 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 GOLGA1Q92805 767 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 KRT83P78385 493 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 C8orf76Q96K31 380 aa11.76□□□□□ -0.53
PTCH1-204ENST00000375290 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CTAGE15A4D2H0 777 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CTAGE8P0CG41 777 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CTAGE6Q86UF2 777 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CTAGE4Q8IX94 777 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 ANKRD18BA2A2Z9 1011 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 HSF2BPO75031 334 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CETN1Q12798 172 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 TBC1D9Q6ZT07 1266 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 UBAC1Q9BSL1 405 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 TSGA10Q9BZW7 698 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.75□□□□□ -0.53
PTCH1-204ENST00000375290 ARHGAP25P42331 645 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-204ENST00000375290 TTC39AQ5SRH9 613 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 SOGA3Q5TF21 947 aa11.75□□□□□ -0.53
PTCH1-204ENST00000375290 CTAGE9A4FU28 777 aa11.74□□□□□ -0.53
PTCH1-204ENST00000375290 KRT18P05783 430 aaKnown RBP11.74□□□□□ -0.53
PTCH1-204ENST00000375290 AMOTQ4VCS5 1084 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms